Gain-of-function IKBKB mutation causes human combined immune deficiency

Author:

Cardinez Chelisa123ORCID,Miraghazadeh Bahar123,Tanita Kay4ORCID,da Silva Elizabeth2,Hoshino Akihiro4,Okada Satoshi5ORCID,Chand Rochna123,Asano Takaki5ORCID,Tsumura Miyuki5,Yoshida Kenichi6,Ohnishi Hidenori7,Kato Zenichiro78,Yamazaki Masahide9ORCID,Okuno Yusuke10,Miyano Satoru1112,Kojima Seiji13,Ogawa Seishi6,Andrews T. Daniel13,Field Matthew A.1314ORCID,Burgio Gaetan3,Morio Tomohiro4,Vinuesa Carola G.13,Kanegane Hirokazu4,Cook Matthew C.123ORCID

Affiliation:

1. Centre for Personalised Immunology, Australian National University, Canberra, Australia

2. Department of Immunology Canberra Hospital, Canberra, Australia

3. Department of Immunology and Infectious Diseases, John Curtin School of Medical Research, Australian National University, Canberra, Australia

4. Department of Child Health and Development, Graduate School of Medical and Dental Sciences, Tokyo Medical and Dental University, Tokyo, Japan

5. Department of Pediatrics, Hiroshima University Graduate School of Biomedical and Health Sciences, Hiroshima, Japan

6. Department of Pathology and Tumor Biology, Graduate School of Medicine, Kyoto University, Kyoto, Japan

7. Department of Pediatrics, Gifu University Graduate School of Medicine, Gifu, Japan

8. Structural Medicine, United Graduate School of Drug Discovery and Medical Information Sciences, Gifu University, Gifu, Japan

9. Department of Internal Medicine, Keiju Medical Center, Nanao, Japan

10. Center for Advanced Medicine and Clinical Research, Nagoya University Hospital, Nagoya, Japan

11. Laboratory of DNA Information Analysis, Human Genome Center, Institute of Medical Science, The University of Tokyo, Tokyo, Japan

12. Laboratory of Sequence Analysis, Human Genome Center, Institute of Medical Science, The University of Tokyo, Tokyo, Japan

13. Department of Pediatrics, Nagoya University Graduate School of Medicine, Nagoya, Japan

14. Australian Institute for Tropical Health and Medicine, James Cook University, Cairns, Australia

Abstract

Genetic mutations account for many devastating early onset immune deficiencies. In contrast, less severe and later onset immune diseases, including in patients with no prior family history, remain poorly understood. Whole exome sequencing in two cohorts of such patients identified a novel heterozygous de novo IKBKB missense mutation (c.607G>A) in two separate kindreds in whom probands presented with immune dysregulation, combined T and B cell deficiency, inflammation, and epithelial defects. IKBKB encodes IKK2, which activates NF-κB signaling. IKK2V203I results in enhanced NF-κB signaling, as well as T and B cell functional defects. IKK2V203 is a highly conserved residue, and to prove causation, we generated an accurate mouse model by introducing the precise orthologous codon change in Ikbkb using CRISPR/Cas9. Mice and humans carrying this missense mutation exhibit remarkably similar cellular and biochemical phenotypes. Accurate mouse models engineered by CRISPR/Cas9 can help characterize novel syndromes arising from de novo germline mutations and yield insight into pathogenesis.

Funder

National Health and Medical Research Council

The Bev and Alan Harvey Bequest

Japan Society for the Promotion of Science

Japan Agency for Medical Research and Development

Publisher

Rockefeller University Press

Subject

Immunology,Immunology and Allergy

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