Transcriptomic characterization revealed that METTL7A inhibits melanoma progression via the p53 signaling pathway and immunomodulatory pathway

Author:

Zhang Duoli1,Zou Tao1,Liu Qingsong2,Chen Jie1,Xiao Mintao1,Zheng Anfu1,Zhang Zhuo1,Du Fukuan134,Dai Yalan5,Xiang Shixin6,Wu Xu134,Li Mingxing134,Chen Yu134,Zhao Yueshui134,Shen Jing134,Chen Guiquan7,Xiao Zhangang134

Affiliation:

1. Department of Pharmacology, School of Pharmacy, Southwest Medical University, Laboratory of Molecular Pharmacology, Luzhou, China

2. Department of Pathology, The First People’s Hospital of Neijiang, Neijiang, China

3. Cell Therapy & Cell Drugs of Luzhou Key Laboratory, Luzhou, China

4. South Sichuan Institute of Translational Medicine, Luzhou, Sichuan, China

5. Department of Oncology, Affiliated Hospital of Southwest Medical University, Luzhou, Sichuan, China

6. Department of Pharmacy, University-Town Hospital of Chongqing Medical University, Chongqing, China

7. Chinese Medicine Hospital Affiliated to Southwest Medical University, Luzhou, Sichuan, China

Abstract

METTL7A is a protein-coding gene expected to be associated with methylation, and its expression disorder is associated with a range of diseases. However, few research have been carried out to explore the relationship between METTL7A and tumor malignant phenotype as well as the involvement potential mechanism. We conducted our research via a combination of silico analysis and molecular biology techniques to investigate the biological function of METTL7A in the progression of cancer. Gene expression and clinical information were extracted from the TCGA database to explore expression variation and prognostic value of METTL7A. In vitro, CCK8, transwell, wound healing and colony formation assays were conducted to explore the biological functions of METT7A in cancer cell. GSEA was performed to explore the signaling pathway involved in METTL7A and validated via western blotting. In conclusion, METTL7A was downregulated in most cancer tissues and its low expression was associated with shorter overall survival. In melanoma, METTL7A downregulation was associated with poorer clinical staging, lower levels of TIL infiltration, higher IC50 levels of chemotherapeutic agents, and poorer immunotherapy outcomes. QPCR results confirm that METTL7A is down-regulated in melanoma cells. Cell function assays showed that METTL7A knockdown promoted proliferation, invasion, migration and clone formation of melanoma cells. Mechanistic studies showed that METTL7A inhibits tumorigenicity through the p53 signaling pathway. Meanwhile, METTL7A is also a potential immune regulatory factor.

Funder

National Natural Science Foundation of China

Sichuan Science and Technology Project

Luxian People’s Government and Southwest Medical University Scientific and Technological Achievements Transfer and Transformation Strategic Cooperation Project

Science and Technology Program of Luzhou, China

Publisher

PeerJ

Subject

General Agricultural and Biological Sciences,General Biochemistry, Genetics and Molecular Biology,General Medicine,General Neuroscience

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