GenomePeek—an online tool for prokaryotic genome and metagenome analysis-Reference-Cited by-同舟云学术

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GenomePeek—an online tool for prokaryotic genome and metagenome analysis

Published:2015-06-16 Issue: Volume:3 Page:e1025
ISSN:2167-8359
Container-title:PeerJ
language:en
Short-container-title:

Author:

McNair Katelyn¹²,Edwards Robert A.¹²³⁴

Affiliation:

1. Department of Computer Science, San Diego State University, San Diego, CA, USA

2. Department of Biology, San Diego State University, San Diego, CA, USA

3. Computational Sciences Research Center, San Diego State University, San Diego, CA, USA

4. Mathematics and Computer Science Division, Argonne National Laboratory, Argonne, IL, USA

Publisher

PeerJ

Subject

General Agricultural and Biological Sciences,General Biochemistry, Genetics and Molecular Biology,General Medicine,General Neuroscience

Link

https://peerj.com/articles/1025.pdf

Reference42 articles.

1. Dissection of phylogenetic relationships among 19 rapidly growing Mycobacterium species by 16S rRNA, hsp65, sodA, recA and rpoB gene sequencing;Adékambi;International Journal of Systematic and Evolutionary Microbiology,2004

2. Gapped BLAST and PSI-BLAST: a new generation of protein database search programs;Altschul;Nucleic Acids Research,1997

3. CopyRighter: a rapid tool for improving the accuracy of microbial community profiles through lineage-specific gene copy number correction;Angly;Microbiome,2014

4. Grinder: a versatile amplicon and shotgun sequence simulator;Angly;Nucleic Acids Research,2012

5. UniProt: the Universal Protein knowledgebase;Apweiler;Nucleic Acids Research,2004

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