Estimation of parameters for a humidity-dependent compartmental model of the COVID-19 outbreak

Author:

Farkas Csaba1,Iclanzan David1,Olteán-Péter Boróka1ORCID,Vekov Géza2

Affiliation:

1. Mathematics and Computer Science, Sapientia Hungarian University of Transylvania, Targu Mures, Romania

2. Mathematics and Computer Science, Babes-Bolyai University of Cluj-Napoca, Cluj-Napoca, Romania

Abstract

Building an effective and highly usable epidemiology model presents two main challenges: finding the appropriate, realistic enough model that takes into account complex biological, social and environmental parameters and efficiently estimating the parameter values with which the model can accurately match the available outbreak data, provide useful projections. The reproduction number of the novel coronavirus (SARS-CoV-2) has been found to vary over time, potentially being influenced by a multitude of factors such as varying control strategies, changes in public awareness and reaction or, as a recent study suggests, sensitivity to temperature or humidity changes. To take into consideration these constantly evolving factors, the paper introduces a time dynamic, humidity-dependent SEIR-type extended epidemiological model with range-defined parameters. Using primarily the historical data of the outbreak from Northern and Southern Italy and with the help of stochastic global optimization algorithms, we are able to determine a model parameter estimation that provides a high-quality fit to the data. The time-dependent contact rate showed a quick drop to a value slightly below 2. Applying the model for the COVID-19 outbreak in the northern region of Italy, we obtained parameters that suggest a slower shrinkage of the contact rate to a value slightly above 4. These findings indicate that model fitting and validation, even on a limited amount of available data, can provide useful insights and projections, uncover aspects that upon improvement might help mitigate the disease spreading.

Funder

Sapientia Foundation Institute for Scientific Research, Romania

Sapientia Hungariae Foundation

Publisher

PeerJ

Subject

General Agricultural and Biological Sciences,General Biochemistry, Genetics and Molecular Biology,General Medicine,General Neuroscience

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