Poppr: an R package for genetic analysis of populations with clonal, partially clonal, and/or sexual reproduction

Author:

Kamvar Zhian N.1,Tabima Javier F.1,Grünwald Niklaus J.12

Affiliation:

1. Department of Botany and Plant Pathology, Oregon State University, Corvallis, OR, USA

2. Horticultural Crops Research Laboratory, USDA-ARS, Corvallis, OR, USA

Publisher

PeerJ

Subject

General Agricultural and Biological Sciences,General Biochemistry, Genetics and Molecular Biology,General Medicine,General Neuroscience

Reference38 articles.

1. Indices of multilocus linkage disequilibrium;Agapow;Molecular Ecology Notes,2001

2. Clonality in soilborne, plant-pathogenic fungi;Anderson;Annual Review of Phytopathology,1995

3. Multilocus structure of natural populations of Hordeum spontaneum;Brown;Genetics,1980

4. A simple method for the calculation of microsatellite genotype distances irrespective of ploidy level;Bruvo;Molecular Ecology,2004

5. Molecular markers reveal cryptic sex in the human pathogen Coccidioides immitis;Burt;Proceedings of the National Academy of Sciences,1996

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