1H-NMR spectroscopy identifies potential biomarkers in serum metabolomic signatures for early stage esophageal squamous cell carcinoma

Author:

Liu Yan-Yan1,Yang Zhong-Xian2,Ma Li-Min3,Wen Xu-Qing3,Ji Huan-Lin4,Li Ke4

Affiliation:

1. Department of Ultrasound, Shenzhen Bao’an Maternity & Child Healthcare Hospital, Shenzhen, Guangdong, China

2. Department of Medical Imaging Center, the 2nd Affiliated Hospital, Shantou University Medical College, Shantou, Guangdong, China

3. Department of Cardiothoracic Surgery, the 2nd Affiliated Hospital, Shantou University Medical College, Shantou, Guangdong, China

4. Department of Public Health, Shantou University Medical College, Shantou, Guangdong, China

Abstract

Background Esophageal squamous cell carcinoma (ESCC) is one of the most prevalent types of upper gastrointestinal malignancies. Here, we used 1H nuclear magnetic resonance spectroscopy (1H-NMR) to identify potential serum biomarkers in patients with early stage ESCC. Methods Sixty-five serum samples from early stage ESCC patients (n = 25) and healthy controls (n = 40) were analysed using 1H-NMR spectroscopy. We distinguished between different metabolites through principal component analysis, partial least squares-discriminant analysis, and orthogonal partial least squares-discriminant analysis (OPLS-DA) using SIMCA-P+ version 14.0 software. Receiver operating characteristic (ROC) analysis was conducted to verify potential biomarkers. Results Using OPLS-DA, 31 altered serum metabolites were successfully identified between the groups. Based on the area under the ROC curve (AUROC), and the biomarker panel with AUROC of 0.969, six serum metabolites (α-glucose, choline, glutamine, glutamate, valine, and dihydrothymine) were selected as potential biomarkers for early stage ESCC. Dihydrothymine particularly was selected as a new feasible biomarker associated with tumor occurrence. Conclusions 1H-NMR spectroscopy may be a useful tumour detection approach in identifying useful metabolic ESCC biomarkers for early diagnosis and in the exploration of the molecular pathogenesis of ESCC.

Funder

National Natural Science Foundation of China

Guangdong Basic and Applied Basic Research Foundation

Medical Scientific Research Foundation of Guangdong Province

Publisher

PeerJ

Subject

General Agricultural and Biological Sciences,General Biochemistry, Genetics and Molecular Biology,General Medicine,General Neuroscience

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