Recurrent attention U-Net for segmentation and quantification of breast arterial calcifications on synthesized 2D mammograms

Author:

AlJabri Manar12,Alghamdi Manal1,Collado-Mesa Fernando3,Abdel-Mottaleb Mohamed4

Affiliation:

1. Department of Computer Science and Artificial Intelligence, Umm Al-Qura University, Makkah, Makkah, Saudi Arabia

2. King Abdul Aziz University, Jeddah, Makkah, Saudi Arabia

3. Department of Radiology, Miller School of Medicine, University of Miami, Miami, Florida, United States

4. Department of Electrical and Computer Engineering, University of Miami, Miami, Florida, United States

Abstract

Breast arterial calcifications (BAC) are a type of calcification commonly observed on mammograms and are generally considered benign and not associated with breast cancer. However, there is accumulating observational evidence of an association between BAC and cardiovascular disease, the leading cause of death in women. We present a deep learning method that could assist radiologists in detecting and quantifying BAC in synthesized 2D mammograms. We present a recurrent attention U-Net model consisting of encoder and decoder modules that include multiple blocks that each use a recurrent mechanism, a recurrent mechanism, and an attention module between them. The model also includes a skip connection between the encoder and the decoder, similar to a U-shaped network. The attention module was used to enhance the capture of long-range dependencies and enable the network to effectively classify BAC from the background, whereas the recurrent blocks ensured better feature representation. The model was evaluated using a dataset containing 2,000 synthesized 2D mammogram images. We obtained 99.8861% overall accuracy, 69.6107% sensitivity, 66.5758% F-1 score, and 59.5498% Jaccard coefficient, respectively. The presented model achieved promising performance compared with related models.

Funder

Makkah Digital Gate Initiative

Emirate of Makkah Province and King Abdulaziz University, DSR, Jeddah, Saudi Arabia

Publisher

PeerJ

Reference42 articles.

1. DU-Net: convolutional network for the detection of arterial calcifications in mammograms;AlGhamdi;IEEE Transactions on Medical Imaging,2020

2. A review on the use of deep learning for medical images segmentation;Aljabri;Neurocomputing,2022

3. Nuclei segmentation with recurrent residual convolutional neural networks based U-Net (R2U-Net);Alom,2018

4. Do breast arterial calcifications on mammography predict elevated risk of coronary artery disease?;Chadashvili;European Journal of Radiology,2016

5. DRINet for medical image segmentation;Chen;IEEE Transactions on Medical Imaging,2018

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