A Coverage Criterion for Spaced Seeds and Its Applications to Support Vector Machine String Kernels andk-Mer Distances
Author:
Affiliation:
1. Laboratoire d'Informatique Fondamentale de Lille (LIFL) (UMR 8022 Lille 1/CNRS) - Inria Lille, Villeneuve d'Ascq, France.
2. Department of Statistics, North Carolina State University, Raleigh, North Carolina.
Publisher
Mary Ann Liebert Inc
Subject
Computational Theory and Mathematics,Computational Mathematics,Genetics,Molecular Biology,Modeling and Simulation
Link
http://www.liebertpub.com/doi/pdf/10.1089/cmb.2014.0173
Reference74 articles.
1. Efficient string matching
2. Masking patterns in sequences: A new class of motif discovery with don’t cares
3. Exact Distribution of a Spaced Seed Statistic for DNA Homology Detection
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