bioOTU: An Improved Method for Simultaneous Taxonomic Assignments and Operational Taxonomic Units Clustering of 16s rRNA Gene Sequences
Author:
Affiliation:
1. Farm Animal Genetic Resources Exploration and Innovation Key Laboratory of Sichuan Province, Chengdu, China.
2. College of Veterinary Medicine, Sichuan Agricultural University, Chengdu, China.
Publisher
Mary Ann Liebert Inc
Subject
Computational Theory and Mathematics,Computational Mathematics,Genetics,Molecular Biology,Modelling and Simulation
Link
http://www.liebertpub.com/doi/pdf/10.1089/cmb.2015.0214
Reference32 articles.
1. Evaluation of the Performances of Ribosomal Database Project (RDP) Classifier for Taxonomic Assignment of 16S rRNA Metabarcoding Sequences Generated from Illumina-Solexa NGS
2. QIIME allows analysis of high-throughput community sequencing data
3. A Comparison of Methods for Clustering 16S rRNA Sequences into OTUs
4. Ribosomal Database Project: data and tools for high throughput rRNA analysis
5. Greengenes, a Chimera-Checked 16S rRNA Gene Database and Workbench Compatible with ARB
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