De Novo Analysis of Peptide Tandem Mass Spectra by Spectral Graph Partitioning-Reference-Cited by-同舟云学术

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De Novo Analysis of Peptide Tandem Mass Spectra by Spectral Graph Partitioning

Published:2006-03 Issue:2 Volume:13 Page:364-378
ISSN:1066-5277
Container-title:Journal of Computational Biology
language:en
Short-container-title:Journal of Computational Biology

Author:

Bern Marshall¹,Goldberg David¹

Affiliation:

1. Palo Alto Research Center, 3333 Coyote Hill Rd., Palo Alto, CA 94304.

Publisher

Mary Ann Liebert Inc

Subject

Computational Theory and Mathematics,Computational Mathematics,Genetics,Molecular Biology,Modeling and Simulation

Link

http://www.liebertpub.com/doi/pdf/10.1089/cmb.2006.13.364

Reference43 articles.

1. Spectral partitioning with multiple eigenvectors

2. Pro-Frame: similarity-based gene recognition in eukaryotic DNA sequences with errors

3. On de novo interpretation of tandem mass spectra for peptide identification

4. Fast algorithm for peptide sequencing by mass spectroscopy

5. A Dynamic Programming Approach to De Novo Peptide Sequencing via Tandem Mass Spectrometry

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1. Critical evaluation of the use of artificial data for machine learning based de novo peptide identification;Computational and Structural Biotechnology Journal;2023

2. An Optimized Comparative Proteomic Approach as a Tool in Neurodegenerative Disease Research;Cells;2022-08-26

3. De novo sequencing of proteins by mass spectrometry;Expert Review of Proteomics;2020-08-02

4. Bioinformatics Methods for Mass Spectrometry-Based Proteomics Data Analysis;International Journal of Molecular Sciences;2020-04-20

5. LTQ Orbitrap Velos in routinede novosequencing of non-tryptic skin peptides from the frogRana latasteiwith traditional and reliable manual spectra interpretation;Rapid Communications in Mass Spectrometry;2015-12-21

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