Pyrodigal: Python bindings and interface to Prodigal, an efficient method for gene prediction in prokaryotes
Author:
Publisher
The Open Journal
Link
https://joss.theoj.org/papers/10.21105/joss.04296.pdf
Reference10 articles.
1. Bioconda: Sustainable and comprehensive software distribution for the life sciences;Grüning;Nature Methods,2018
2. Valgrind: A framework for heavyweight dynamic binary instrumentation;Nethercote;Proceedings of the 28th ACM SIGPLAN conference on programming language design and implementation,2007
3. proGenomes2: An improved database for accurate and consistent habitat, taxonomic and functional annotations of prokaryotic genomes;Mende;Nucleic Acids Research,2020
4. Prodigal: Prokaryotic gene recognition and translation initiation site identification;Hyatt;BMC Bioinformatics,2010
5. Accurate de novo identification of biosynthetic gene clusters with GECCO;Carroll,2021
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