btllib: A C++ library with Python interface for efficient genomic sequence processing-Reference-Cited by-同舟云学术

btllib: A C++ library with Python interface for efficient genomic sequence processing

Published:2022-11-04 Issue:79 Volume:7 Page:4720
ISSN:2475-9066
Container-title:Journal of Open Source Software
language:
Short-container-title:JOSS

Author:

Nikolić Vladimir^ORCID,Kazemi Parham,Coombe Lauren^ORCID,Wong Johnathan,Afshinfard Amirhossein^ORCID,Chu Justin,Warren René L.^ORCID,Birol Inanç^ORCID

Publisher

The Open Journal

Subject

General Earth and Planetary Sciences,General Environmental Science

Link

https://joss.theoj.org/papers/10.21105/joss.04720.pdf

Reference9 articles.

1. The SeqAn c++ template library for efficient sequence analysis: A resource for programmers;Reinert;Journal of Biotechnology,2017

2. Biopython: freely available Python tools for computational molecular biology and bioinformatics;Cock;Bioinformatics,2009

3. ntHash: recursive nucleotide hashing;Mohamadi;Bioinformatics,2016

4. Mismatch-tolerant, alignment-free sequence classification using multiple spaced seeds and multiindex bloom filters;Chu;Proceedings of the National Academy of Sciences,2020

5. ntJoin: Fast and lightweight assembly-guided scaffolding using minimizer graphs;Coombe;Bioinformatics,2020

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