Spruceup: fast and flexible identification, visualization, and removal of outliers from large multiple sequence alignments-Reference-Cited by-同舟云学术

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Spruceup: fast and flexible identification, visualization, and removal of outliers from large multiple sequence alignments

Published:2019-10-08 Issue:42 Volume:4 Page:1635
ISSN:2475-9066
Container-title:Journal of Open Source Software
language:
Short-container-title:JOSS

Author:

Borowiec Marek

Publisher

The Open Journal

Link

https://joss.theoj.org/papers/10.21105/joss.01635.pdf

Reference22 articles.

1. Phylogenomics, biogeography and diversification of obligate mealybug-tending ants in the genus Acropyga

2. Extracting phylogenetic signal and accounting for bias in whole-genome data sets supports the Ctenophora as sister to remaining Metazoa

3. Bayes factors unmask highly variable information content, bias, and extreme influence in phylogenomic analyses

4. trimAl: a tool for automated alignment trimming in large-scale phylogenetic analyses

5. BMGE (Block Mapping and Gathering with Entropy): a new software for selection of phylogenetic informative regions from multiple sequence alignments

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1. Phylogenomics and biogeography of the small carpenter bees (Apidae: Xylocopinae: Ceratina);Molecular Phylogenetics and Evolution;2024-09

2. Discovery of a new tarantula species from the Madrean Sky Islands and the first documented instance of syntopy between two montane endemics (Araneae, Theraphosidae, Aphonopelma): a case of prior mistaken identity;ZooKeys;2024-08-16

3. Integrative taxonomy reveals inflated biodiversity in the European Temnothorax unifasciatus complex (Hymenoptera: Formicidae);Zoologica Scripta;2024-08-07

4. Phylogenomics resolve the systematics and biogeography of the ant tribe Myrmicini and tribal relationships within the hyperdiverse ant subfamily Myrmicinae;2024-08-05

5. A new phylogeny for Aves is compromised by pervasive misalignment and homology problems;Proceedings of the National Academy of Sciences;2024-07-08

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