Temporal profiling with ultra-deep RRBS sequencing reveals the relative rarity of stably maintained methylated CpG sites in human cells
Author:
Publisher
China Science Publishing & Media Ltd.
Subject
General Medicine,Biochemistry,Biophysics
Link
https://engine.scichina.com/doi/pdf/03F02C15BE4145A9872945BA7B1B0211
Reference10 articles.
1. Dahlet T, Argüeso Lleida A, Al Adhami H, Dumas M, Bender A, Ngondo RP, Tanguy M. Genome-wide analysis in the mouse embryo reveals the importance of DNA methylation for transcription integrity. Nat Commun, 2020, 11: 1-4.
2. Petryk N, Bultmann S, Bartke T, Defossez PA. Staying true to yourself: mechanisms of DNA methylation maintenance in mammals. Nucleic Acids Res, 2021, 49: 3020-3032.
3. Lee YK, Jin S, Duan S, Lim YC, Ng DP, Lin XM, Yeo GS. Improved reduced representation bisulfite sequencing for epigenomic profiling of clinical samples. Biol Proced Online, 2014, 16: 1-9.
4. Holmes EE, Jung M, Meller S, Leisse A, Sailer V, Zech J, Mengdehl M. Performance evaluation of kits for bisulfite-conversion of DNA from tissues, cell lines, FFPE tissues, aspirates, lavages, effusions, plasma, serum, and urine. PLoS ONE, 2014, 9:
5. Maunakea AK, Nagarajan RP, Bilenky M, Ballinger TJ, D′Souza C, Fouse SD, Johnson BE. Conserved role of intragenic DNA methylation in regulating alternative promoters. Nature, 2010, 466: 253-257.
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