Anagallis is a computer program for parsimony analysis of character hierarchies that provides a solution to the well-known problem of inapplicable data by maximizing homology in such hierarchies. This file is a pdf-version of a dump of the built-in documentation of version 1.03 (8 September 2020). A gzipped tarfile with Linux and macOS executables and how-to-get-started information are available at www.anagallis.be.