Identifying 3D Genome Organization in Diploid Organisms via Euclidean Distance Geometry-Reference-Cited by-同舟云学术

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Identifying 3D Genome Organization in Diploid Organisms via Euclidean Distance Geometry

Published:2022-02-28 Issue:1 Volume:4 Page:204-228
ISSN:2577-0187
Container-title:SIAM Journal on Mathematics of Data Science
language:en
Short-container-title:SIAM Journal on Mathematics of Data Science

Author:

Belyaeva Anastasiya,Kubjas Kaie^ORCID,Sun Lawrence J.,Uhler Caroline^ORCID

Funder

MIT-IBM Watson AI Lab

Office of Naval Research

Horizon 2020 Framework Programme

Massachusetts Institute of Technology

National Science Foundation

Simons Foundation

Publisher

Society for Industrial & Applied Mathematics (SIAM)

Reference47 articles.

1. Complex multi-enhancer contacts captured by genome architecture mapping

2. Three-Dimensional Maps of All Chromosomes in Human Male Fibroblast Nuclei and Prometaphase Rosettes

3. The Convex Geometry of Linear Inverse Problems

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1. Uniquely Realisable Graphs in Analytic Normed Planes;International Mathematics Research Notices;2024-07-22

2. 3D Genome Reconstruction from Partially Phased Hi-C Data;Bulletin of Mathematical Biology;2024-02-22

3. Does multi-way, long-range chromatin contact data advance 3D genome reconstruction?;BMC Bioinformatics;2023-02-24

4. The first embryo, the origin of cancer and animal phylogeny. I. A presentation of the neoplastic process and its connection with cell fusion and germline formation;Frontiers in Cell and Developmental Biology;2023-01-04

5. Can 3D diploid genome reconstruction from unphased Hi-C data be salvaged?;NAR Genomics and Bioinformatics;2022-03-31

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