Time-resolved cryogenic electron tomography for the study of transient cellular processes

Author:

Yoniles Joseph1,Summers Jacob A.2,Zielinski Kara A.3,Antolini Cali45,Panjalingam Mayura6,Lisova Stella5,Moss Frank R.5,Di Perna Maximus Aldo7,Kupitz Christopher5,Hunter Mark S.5,Pollack Lois3,Wakatsuki Soichi24,Dahlberg Peter D.4ORCID

Affiliation:

1. Biophysics Program, Stanford University School of Medicine, Stanford, CA 94305

2. Department of Structural Biology, Stanford University School of Medicine, Stanford, CA 94305

3. School of Applied and Engineering Physics, Cornell University, Ithaca, NY 14853

4. Stanford Synchrotron Radiation Lightsource, SLAC National Accelerator Laboratory, Menlo Park, CA 94025

5. Linac Coherent Light Source, SLAC National Accelerator Laboratory, Menlo Park, CA 94025

6. Department of Chemistry, New York University, New York, NY 10003

7. Department of Electrical Engineering, Stanford University, Stanford, CA 94305

Abstract

Cryogenic electron tomography (cryo-ET) is the highest resolution imaging technique applicable to the life sciences, enabling subnanometer visualization of specimens preserved in their near native states. The rapid plunge freezing process used to prepare samples lends itself to time-resolved studies, which researchers have pursued for in vitro samples for decades. Here, we focus on developing a freezing apparatus for time-resolved studies in situ. The device mixes cellular samples with solution-phase stimulants before spraying them directly onto an electron microscopy grid that is transiting into cryogenic liquid ethane. By varying the flow rates of cell and stimulant solutions within the device, we can control the reaction time from tens of milliseconds to over a second before freezing. In a proof-of-principle demonstration, the freezing method is applied to a model bacterium, Caulobacter crescentus, mixed with an acidic buffer. Through cryo-ET we resolved structural changes throughout the cell, including surface-layer protein dissolution, outer membrane deformation, and cytosolic rearrangement, all within 1.5 s of reaction time. This new approach, Time-Resolved cryo-ET (TR-cryo-ET), enhances the capabilities of cryo-ET by incorporating a subsecond temporal axis and enables the visualization of induced structural changes at the molecular, organelle, or cellular level.

Publisher

American Society for Cell Biology (ASCB)

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