Whole genome sequencing of nine <i>Vibrio parahaemolyticus</i> strains encoding ( <i>Pir</i> ) toxin-like genes from shrimp cultures in northern Peru using Oxford Nanopore technology-Reference-Cited by-同舟云学术

Whole genome sequencing of nine Vibrio parahaemolyticus strains encoding ( Pir ) toxin-like genes from shrimp cultures in northern Peru using Oxford Nanopore technology

Published:2024-03-12 Issue:3 Volume:13 Page:
ISSN:2576-098X
Container-title:Microbiology Resource Announcements
language:en
Short-container-title:Microbiol Resour Announc

Author:

Tapia-Chirinos Stephanie¹,Salcedo-Mejia Luis Alberto¹,Domínguez-Mendoza Luz¹,Nuñure-Ortega Jeferson¹,Ramos-Espinoza Fernando¹,Gómez-Sánchez Muriel¹,Tataje-Lavanda Luis²^ORCID,Velazco-Peña Rodolfo¹^ORCID

Affiliation:

1. Laboratorio de Sanidad Acuícola-Sede Tumbes, Organismo Nacional de Sanidad Acuícola (SANIPES), Lima, Peru

2. Escuela Profesional de Medicina Humana, Universidad Privada San Juan Bautista, Lima, Peru

Abstract

ABSTRACT Nine Peruvian isolates of Vibrio parahaemolyticus were characterized through sequencing, revealing the presence of simple sequence repeat, Pir toxin-like genes, and genes associated with antibiotic resistance, toxic components, and transposable elements. These findings expand our understanding of the genetic diversity, disease resistance, and virulence in cultivated shrimp populations in Peru.

Publisher

American Society for Microbiology

Link

https://journals.asm.org/doi/pdf/10.1128/mra.00511-23

Reference11 articles.

1. Genotyping of virulence plasmid from Vibrio parahaemolyticus isolates causing acute hepatopancreatic necrosis disease in shrimp

2. Photorhabdus insect-related (Pir) toxin-like genes in a plasmid of Vibrio parahaemolyticus, the causative agent of acute hepatopancreatic necrosis disease (AHPND) of shrimp

3. The opportunistic marine pathogenVibrio parahaemolyticusbecomes virulent by acquiring a plasmid that expresses a deadly toxin

4. Acute hepatopancreatic necrosis disease (VPAHPND), a chronic disease in shrimp (Penaeus vannamei) population raised in latin America

5. NanoGalaxy: Nanopore long-read sequencing data analysis in Galaxy