Development of the Organonitrogen Biodegradation Database: Teaching Bioinformatics and Collaborative Skills to Undergraduates during a Pandemic †-Reference-Cited by-同舟云学术

Development of the Organonitrogen Biodegradation Database: Teaching Bioinformatics and Collaborative Skills to Undergraduates during a Pandemic †

Published:2021-04-30 Issue:1 Volume:22 Page:
ISSN:1935-7877
Container-title:Journal of Microbiology & Biology Education
language:en
Short-container-title:J Microbiol Biol Educ.

Author:

Robinson Serina L.¹,Biernath Troy²,Rosenthal Caleb³,Young Dean³,Wackett Lawrence P.⁴^ORCID,Martinez-Vaz Betsy M.³

Affiliation:

1. Institute of Microbiology, ETH Zurich, Zürich 8093, Switzerland

2. Department of Chemistry and Biochemistry Program, Bethel University, Saint Paul, Minnesota, USA 55112

3. Department of Biology and Biochemistry Program, Hamline University, Saint Paul, Minnesota, USA 55104

4. Department of Biochemistry, Molecular Biology and Biophysics and Biotechnology Institute, University of Minnesota, Saint Paul, Minnesota, USA 55108

Abstract

Physical distancing and inaccessibility to laboratory facilities created an opportunity to transition undergraduate research experiences to remote, digital platforms, adding another level of pedagogy to their training. Basic bioinformatics skills together with critical analysis of scientific literature are essential for addressing research questions in modern biology.

Publisher

American Society for Microbiology

Subject

General Agricultural and Biological Sciences,General Immunology and Microbiology,General Biochemistry, Genetics and Molecular Biology,Education

Link

https://journals.asm.org/doi/pdf/10.1128/jmbe.v22i1.2351

Reference22 articles.

1. American Association for the Advancement of Science. 2011. Vision and Change in Undergraduate Biology Education. A call to action: a summary of recommendations made at a national conference organized by the American Association for the Advancement of Science, July 15–17, 2009. Washington, DC.

2. A Call to Develop Course-Based Undergraduate Research Experiences (CUREs) for Nonmajors Courses

3. National Research Council. 2009. A New Biology for the 21st Century. National Academies Press, Washington, DC.

4. How COVID-19 Is Affecting Undergraduate Research Experiences

5. COVID-19 shakes up summer internship and research opportunities: how companies, research experiences, and undergraduate students are adapting;Parry W;Chem Eng News,2020

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1. Current bioinformatics tools for biodegradation of xenobiotic compounds;Frontiers in Environmental Science;2022-08-26

2. Development of a Remote, Course-Based Undergraduate Experience to Facilitate In Silico Study of Microbial Metabolic Pathways;Journal of Microbiology & Biology Education;2022-04-29