Genome Sequence of Classical Swine Fever Virus NIVEDI-165, Subtype 1.1, a Field Virus Strain Isolated from the Southern Part of India-Reference-Cited by-同舟云学术

Genome Sequence of Classical Swine Fever Virus NIVEDI-165, Subtype 1.1, a Field Virus Strain Isolated from the Southern Part of India

Published:2019-05-23 Issue:21 Volume:8 Page:
ISSN:2576-098X
Container-title:Microbiology Resource Announcements
language:en
Short-container-title:Microbiol Resour Announc

Author:

Patil S. S.¹,Suresh K. P.²,Amachawadi R. G.³^ORCID,Meekins David A.⁴,Richt J. A.⁴,Mondal Mainak²,Hiremath J.¹,Hemadri D.¹,Rahman H.⁵,Roy Parimal¹

Affiliation:

1. Virology Section, ICAR-National Institute of Veterinary Epidemiology and Disease Informatics (NIVEDI), Yelahanka, Bengaluru, India

2. Disease Informatics Laboratory, ICAR-National Institute of Veterinary Epidemiology and Disease Informatics (NIVEDI), Yelahanka, Bengaluru, India

3. Department of Clinical Sciences, College of Veterinary Medicine, Kansas State University, Manhattan, Kansas, USA

4. Department of Diagnostic Medicine/Pathobiology (CEEZAD), College of Veterinary Medicine, Kansas State University, Manhattan, Kansas, USA

5. Regional Representative for South Asia, ILRI, New Delhi, India

Abstract

The whole-genome sequence of an Indian field isolate of classical swine fever virus, NIVEDI-165, was found to be subtype 1.1, and it showed 89 to 99% amino acid identity and 84 to 99% nucleotide identity with four and five Indian classical swine fever virus (CSFV) isolates, respectively. To the best of our knowledge, this is the first report on a full-genome sequence of CSFV from South India.

Publisher

American Society for Microbiology

Subject

Genetics,Immunology and Microbiology (miscellaneous),Molecular Biology

Link

https://journals.asm.org/doi/pdf/10.1128/MRA.00295-19

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