Genome Reduction in Psychromonas Species within the Gut of an Amphipod from the Ocean’s Deepest Point

Author:

Zhang Weipeng1,Tian Ren-Mao1,Sun Jin1,Bougouffa Salim2,Ding Wei1,Cai Lin1,Lan Yi1,Tong Haoya1,Li Yongxin1,Jamieson Alan J.3,Bajic Vladimir B.2,Drazen Jeffrey C.4,Bartlett Douglas5,Qian Pei-Yuan1

Affiliation:

1. Division of Life Science, Hong Kong University of Science and Technology, Kowloon, Hong Kong, China

2. Computational Bioscience Research Center, King Abdullah University of Science and Technology, Thuwal, Saudi Arabia

3. School of Marine Science and Technology, Newcastle University, Newcastle Upon Tyne, Tyne and Wear, United Kingdom

4. Department of Oceanography, University of Hawaii at Manoa, Honolulu, Hawaii, USA

5. Marine Biology Research Division, Scripps Institution of Oceanography, University of California San Diego, La Jolla, California, USA

Abstract

As a unique but poorly investigated habitat within marine ecosystems, hadal trenches have received interest in recent years. This study explores the gut microbial composition and function in hadal amphipods, which are among the dominant carrion feeders in hadal habitats. Further analyses of a dominant strain revealed genomic features that may contribute to its adaptation to the amphipod gut environment. Our findings provide new insights into animal-associated bacteria in the hadal biosphere.

Publisher

American Society for Microbiology

Subject

Computer Science Applications,Genetics,Molecular Biology,Modeling and Simulation,Ecology, Evolution, Behavior and Systematics,Biochemistry,Physiology,Microbiology

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