Deep Sequencing of Urine Specimens Detects Two BK Polyomavirus Genotypes in a Hematopoietic Stem Cell Transplant Recipient-Reference-Cited by-同舟云学术

Deep Sequencing of Urine Specimens Detects Two BK Polyomavirus Genotypes in a Hematopoietic Stem Cell Transplant Recipient

Published:2020-01-30 Issue:5 Volume:9 Page:
ISSN:2576-098X
Container-title:Microbiology Resource Announcements
language:en
Short-container-title:Microbiol Resour Announc

Author:

Van Trang Dinh¹²^ORCID,Dwyer Dominic E.²³,Jeoffreys Neisha³,Kok Jen³,Nankivell Brian J.⁴,Rockett Rebecca J.²⁵

Affiliation:

1. Clinical Laboratory, National Hospital of Tropical Diseases, Dong Da, Hanoi, Vietnam

2. Sydney Medical School, The University of Sydney, Camperdown, NSW, Australia

3. NSW Health Pathology-Institute of Clinical Pathology and Medical Research, Westmead, NSW, Australia

4. Department of Renal Medicine, Westmead Hospital, Westmead, NSW, Australia

5. Centre for Infectious Diseases and Microbiology-Public Health, Sydney, NSW, Australia

Abstract

BK polyomavirus (BKPyV) is an important pathogen in transplant recipients. We report four draft BKPyV genomes, three of BKPyV genotype I (subtype I-b2) (AUS-105, AUS-106, and AUS-108) and one of genotype II (AUS-107). These draft genomes were identified in longitudinal urine samples collected from a single hematopoietic stem cell transplant recipient.

Publisher

American Society for Microbiology

Subject

Genetics,Immunology and Microbiology (miscellaneous),Molecular Biology

Link

https://journals.asm.org/doi/pdf/10.1128/MRA.01461-19

Reference12 articles.

1. HUMAN POLYOMA VIRUS-ASSOCIATED INTERSTITIAL NEPHRITIS IN THE ALLOGRAFT KIDNEY1

2. Association of BK Viruria with Hemorrhagic Cystitis in Recipients of Bone Marrow Transplants

3. Neutralizing Antibody–Mediated Response and Risk of BK Virus–Associated Nephropathy

4. Prospective Monitoring of BK Virus Load after Discontinuing Sirolimus Treatment in a Renal Transplant Patient with BK Virus Nephropathy

5. A quantification of human cells using an ERV-3 real time PCR assay