WHO Critical Priority Escherichia coli as One Health Challenge for a Post-Pandemic Scenario: Genomic Surveillance and Analysis of Current Trends in Brazil

Author:

Fuga Bruna123,Sellera Fábio P.345,Cerdeira Louise167ORCID,Esposito Fernanda23,Cardoso Brenda13,Fontana Herrison23ORCID,Moura Quézia138,Cardenas-Arias Adriana13,Sano Elder13,Ribas Rosineide M.9,Carvalho Albalúcia C.10,Tognim Maria Cristina B.11,de Morais Marcia Maria C.12,Quaresma Ana Judith P. G.13,Santana Ângela Patrícia14,Reis Joice N.15,Pilonetto Marcelo16,Vespero Eliana Carolina17,Bonelli Raquel R.18ORCID,Cerqueira Aloysio M. F.19,Sincero Thaís C. M.20,Lincopan Nilton123ORCID

Affiliation:

1. Department of Microbiology, Instituto de Ciências Biomédicas, University of São Paulo, São Paulo, Brazil

2. Department of Clinical Analysis, Faculty of Pharmaceutical Sciences, University of São Paulo, São Paulo, Brazil

3. One Health Brazilian Resistance Project (OneBR), São Paulo, Brazil

4. Department of Internal Medicine, School of Veterinary Medicine and Animal Science, University of São Paulo, São Paulo, Brazil

5. School of Veterinary Medicine, Metropolitan University of Santos, Santos, Brazil

6. Department of Infectious Diseases, Central Clinical School, Monash University, Melbourne, Australia

7. Department of Vector Biology, Liverpool School of Tropical Medicine, Liverpool, UK

8. Faculty of Health Sciences, Federal University of Grande Dourados, Dourados, Mato Grosso do Sul, Brazil

9. Laboratory of Molecular Microbiology, Institute of Biomedical Sciences, Federal University of Uberlândia, Uberlândia, Brazil

10. Clinical Laboratory, Federal University of Paraiba, João Pessoa, Paraíba, Brazil

11. School of Pharmacy, State University of Maringá, Maringá, Brazil

12. Institute of Biological Sciences, University of Pernambuco, Recife, Brazil

13. Laboratory of Special Pathogen Infections, Bacteriology and Mycology, Evandro Chagas Institute, Ananindeua, Brazil

14. Faculty of Agronomy and Veterinary Medicine, University of Brasília, Brasília, Brazil

15. Faculty of Pharmacy, Federal University of Bahia, Salvador, Brazil

16. Central Laboratory of the State of Paraná-LACEN, São Jose dos Pinhais, Brazil

17. Microbiology Laboratory of the University Hospital of Londrina, State University of Londrina, Lonrina, Brazil

18. Medical Microbiology Research Laboratory, Paulo de Góes Institute of Microbiology, Federal University of Rio de Janeiro, Rio de Janeiro, Brazil

19. Laboratory of Enteropathogens, Veterinary and Food Microbiology, Biomedical Institute, Fluminense Federal University, Niterói, Brazil

20. Laboratory of Applied Molecular Microbiology, Department of Clinical Analysis, Federal University of Santa Catarina, Florianópolis, Brazil

Abstract

A One Health approach for antimicrobial resistance must integrate whole-genome sequencing surveillance data of critical priority pathogens from human, animal and environmental sources to track hot spots and routes of transmission and developing effective prevention and control strategies. As part of the Grand Challenges Explorations: New Approaches to Characterize the Global Burden of Antimicrobial Resistance Program, we present genomic data of WHO critical priority carbapenemase-resistant, ESBL-producing, and/or colistin-resistant Escherichia coli strains isolated from humans and nonhuman sources in Brazil, a country with continental proportions and high levels of antimicrobial resistance.

Funder

Bill and Melinda Gates Foundation

Coordenação de Aperfeiçoamento de Pessoal de Nível Superior

Fundação de Amparo à Pesquisa do Estado de São Paulo

MCTI | Conselho Nacional de Desenvolvimento Científico e Tecnológico

Publisher

American Society for Microbiology

Subject

Infectious Diseases,Cell Biology,Microbiology (medical),Genetics,General Immunology and Microbiology,Ecology,Physiology

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