False aminoglycoside resistance in Enterobacterales and non-fermenters by an automated testing system: a descriptive study

Author:

Klein Klouwenberg P. M. C.1ORCID,Altorf–van der Kuil W.2,van Griethuysen A. J.3,Hendriks M.3,Kuijper E. J.2ORCID,Notermans D. W.2,Schoffelen A. F.2ORCID,Cohen Stuart J.W.T.4,Melles D.C.5,van Dijk K.6,Alzubaidy A.7,Scholing M.8,Kuil S.D.9,Blaauw G.J.10,Altorf–van der Kuil W.2,Bierman S.M.2,de Greeff S.C.2,Groenendijk S.R.2,Hertroys R.2,Marchal N.2,Monen J.C.M.2,Polman J.2,van den Reek W.J.2,Schneeberger–van der Linden C.2,Schoffelen A.F.2,Wielders C.C.H.2,de Wit B.J.2,Zoetigheid R.E.2,van den Bijllaardt W.11,Kraan E.M.12,Haeseker M.B.13,da Silva J.M.14,de Jong E.15,Maraha B.16,van Griethuysen A.J.3,Wintermans B.B.17,van Trijp M.J.C.A.18,Muller A.E.19,Wong M.20,Ott A.21,Bathoorn E.22,Lokate M.22,Sinnige J.23,Melles D.C.24,Renders N.H.25,Dorigo–Zetsma J.W.26,Bakker L.J.26,Waar K.27,van der Beek M.T.28,Leversteijn–van Hall M.A.29,van Mens S.P.30,Schaftenaar E.31,Nabuurs–Franssen M.H.32,Maat I.33,Sturm P.D.J.34,Diederen B.M.W.35,Bode L.G.M.36,Ong D.S.Y.37,van Rijn M.38,Pontesilli O.38,Dinant S.39,van Dam D.W.40,de Brauwer E.I.G.B.40,Bentvelsen R.G.4141,Buiting A.G.M.42,Vlek A.L.M.43,de Graaf M.44,Troelstra A.45,Jansz A.R.46,van Meer M.P.A.47,de Vries J.48,Machiels J.49,

Affiliation:

1. Department of pharmacy, Fundashon Mariadal , Kralendijk, Bonaire, the Netherlands

2. Centre for Infectious Disease Control (CIb), National Institute for Public Health and the Environment (RIVM) , Bilthoven, the Netherlands

3. Department of Medical Microbiology, Gelderse Vallei Hospital , Ede, the Netherlands

4. Department of Medical Microbiology, Noordwest Ziekenhuisgroep , Alkmaar, the Netherlands

5. Department of Medical Microbiology, Meander Medical Center , Amersfoort, the Netherlands

6. Department of Medical Microbiology and Infection Prevention, Amsterdam UMC, University of Amsterdam, Amsterdam Infection and Immunity Institute , Amsterdam, the Netherlands

7. Department of Medical Microbiology, Atalmedial , Amsterdam, the Netherlands

8. Department of Medical Microbiology, OLVG Lab BV , Amsterdam, the Netherlands

9. Public Health Service, Public Health Laboratory , Amsterdam, the Netherlands

10. Department of Medical Microbiology and Infection Prevention, Gelre Hospitals , Apeldoorn, the Netherlands

11. Microvida Amphia, Laboratory for Microbiology and Infection Control , Breda, the Netherlands

12. Department of Medical Microbiology, IJsselland Hospital , Capelle aan den IJssel, the Netherlands

13. Department of Medical Microbiology, Haeseker, Reinier de Graaf Group , Delft, the Netherlands

14. Department of Medical Microbiology, Deventer Hospital , Deventer, the Netherlands

15. Department of Medical Microbiology, Slingeland Hospital , Doetinchem, the Netherlands

16. Department of Medical Microbiology, Albert Schweitzer Hospital , Dordrecht, the Netherlands

17. Department of Medical Microbiology, Admiraal De Ruyter Hospital , Goes, the Netherlands

18. Department of Medical Microbiology and Infection Prevention, Groene Hart Hospital , Gouda, the Netherlands

19. Department of Medical Microbiology, Haaglanden MC , 's-Gravenhage, the Netherlands

20. Department of Medical Microbiology, Haga Hospital , 's-Gravenhage, the Netherlands

21. Certe, Medical Microbiology Groningen|Drenthe , Groningen, the Netherlands

22. Department of Medical Microbiology, University of Groningen, University Medical Center , Groningen, the Netherlands

23. Regional Public Health Laboratory Haarlem , Haarlem, the Netherlands

24. Department of Medical Microbiology, St Jansdal Hospital , Harderwijk, the Netherlands

25. Department of Medical Microbiology and Infection Control, Jeroen Bosch Hospital , 's-Hertogenbosch, the Netherlands

26. Department of Medical Microbiology, CBSL, Tergooi MC , Hilversum, the Netherlands

27. Certe, Medical Microbiology Friesland|NOP , Leeuwarden, the Netherlands

28. Department of Medical Microbiology, Leiden University Medical Center , Leiden, the Netherlands

29. Department of Medical Microbiology, Eurofins Clinical Diagnostics , Leiden-Leiderdorp, the Netherlands

30. Department of Medical Microbiology, Maastricht University Medical Centre , Maastricht, the Netherlands

31. Department of Medical Microbiology and Immunology, St Antonius Hospital , Nieuwegein, the Netherlands

32. Department of Medical Microbiology and Infectious Diseases, Canisius Wilhelmina Hospital , Nijmegen, the Netherlands

33. Department of Medical Microbiology, Radboud University Medical Center , Nijmegen, the Netherlands

34. Laurentius Hospital , Roermond, the Netherlands

35. Department of Medical Microbiology, Bravis Hospital , Roosendaal, the Netherlands

36. Department of Medical Microbiology and Infectious Diseases, Erasmus University Medical Center , Rotterdam, the Netherlands

37. Department of Medical Microbiology and Infection Control, Franciscus Gasthuis and Vlietland , Rotterdam, the Netherlands

38. Department of Medical Microbiology, Ikazia Hospital , Rotterdam, the Netherlands

39. Star-SHL , Rotterdam, the Netherlands

40. Department of Medical Microbiology and Infection Control, Zuyderland Medical Centre , Sittard-Geleen, the Netherlands

41. Department of Medical Microbiology, Microvida ZorgSaam , Terneuzen, the Netherlands

42. Department of Medical Microbiology, St. Elisabeth Hospital , Tilburg, the Netherlands

43. Department of Medical Microbiology and Immunology, Diakonessenhuis , Utrecht, the Netherlands

44. Department of Medical Microbiology, Saltro Diagnostic Centre , Utrecht, the Netherlands

45. Department of Medical Microbiology, University Medical Center Utrecht , Utrecht, the Netherlands

46. Department of Medical Microbiology, Eurofins-PAMM , Veldhoven, the Netherlands

47. Rijnstate Hospital, Laboratory for Medical Microbiology and Immunology , Velp, the Netherlands

48. Department of Medical Microbiology, VieCuri Medical Center , Venlo, the Netherlands

49. Isala Hospital, Laboratory of Medical Microbiology and Infectious Diseases , Zwolle, the Netherlands

Abstract

ABSTRACT The majority of antimicrobial susceptibility testing (AST) in Dutch medical microbiology laboratories (MMLs) is performed using the automated system VITEK2 or Phoenix. One of the Phoenix users noted a high percentage of gentamicin resistance in Proteus mirabilis compared to national resistance data. We therefore performed a descriptive analysis comparing gentamicin and tobramycin minimum inhibitory concentration (MIC) distributions for Enterobacterales and non-fermenters as measured using VITEK2 and Phoenix. Routine susceptibility data from 5 MMLs using Phoenix and 31 using VITEK2 with complete data in the Dutch national surveillance system for antimicrobial resistance from January 2016 to December 2021 were included. A panel of 12 discrepant isolates was sent to Becton Dickinson for confirmation. In general, Phoenix measured higher MICs, with discrepancies being most prevalent for Proteus , Providencia , Morganella , Serratia, and Acinetobacter species (borderline susceptibility for gentamicin ranging from 1% for VITEK2 to 67% for Phoenix systems), and less, but still clinically relevant, for Escherichia coli (1%–12%). Furthermore, we observed a yearly increase in resistance for Proteus and Providencia species measured by Phoenix. Similar discrepancies were found for tobramycin. The company confirmed our findings on all strains. Significantly more false aminoglycoside borderline susceptible and resistant Enterobacterales were found using Phoenix compared to the VITEK2 system. These findings should be taken into consideration in the development of clinical treatment guidelines for patients with sepsis. IMPORTANCE Antimicrobial sensitivity data are important to guide antimicrobial therapy. In microbiological laboratories, routine sensitivity measurements are typically performed with automated testing systems such as VITEK2 and Phoenix. Using data from the Dutch national surveillance system for antimicrobial resistance over a 6-year period, we found that the measured minimum inhibitory concentrations for aminoglycosides in Enterobacterales and non-fermenters were too high for the Phoenix system. In addition, we observed a yearly increase in resistance for several species measured by Phoenix. These findings might have consequences for clinical treatment of patients with sepsis.

Publisher

American Society for Microbiology

Subject

Infectious Diseases,Cell Biology,Microbiology (medical),Genetics,General Immunology and Microbiology,Ecology,Physiology

Reference12 articles.

1. The Dutch working party on antibiotic policy (SWAB) guideline for empirical Antibacterial therapy of sepsis in adults. 2020. Available from: https://swab.nl/exec/file/download/144

2. Surviving sepsis campaign: international guidelines for management of sepsis and septic shock 2021

3. The European Committee on antimicrobial susceptibility testing - EUCAST. 2022. Available from: https://www.eucast.org/fileadmin/src/media/PDFs/EUCAST_files/Breakpoint_tables/v_12.0_Breakpoint_Tables.xlsx

4. Improving peak concentrations of a single dose regime of gentamicin in patients with sepsis in the emergency department

5. National laboratory-based surveillance system for antimicrobial resistance: a successful tool to support the control of antimicrobial resistance in the Netherlands

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