Emergence and Spread of the SARS-CoV-2 Variant of Concern Delta across Different Brazilian Regions-Reference-Cited by-同舟云学术

Emergence and Spread of the SARS-CoV-2 Variant of Concern Delta across Different Brazilian Regions

Published:2022-10-26 Issue:5 Volume:10 Page:
ISSN:2165-0497
Container-title:Microbiology Spectrum
language:en
Short-container-title:Microbiol Spectr

Author:

Arantes Ighor¹²^ORCID,Gomes Naveca Felipe³⁴,Gräf Tiago⁵,Miyajima Fábio⁶,Faoro Helisson⁷,Luz Wallau Gabriel⁸,Delatorre Edson⁹,Reis Appolinario Luciana¹,Cavalcante Pereira Elisa¹^ORCID,Venas Tainá Moreira Martins¹,Sampaio Rocha Alice¹,Serrano Lopes Renata¹^ORCID,Mendonça Siqueira Marilda¹,Bello Gonzalo²^ORCID,Cristina Resende Paola¹^ORCID,Araújo Carlos Leonardo,Akesenen Cleber Furtado,Dias Fernando Braga Stehling,Duarte Igor Oliveira,Bezerra Jamille Mendes,Sousa Joaquim Cesar,Jerônimo Pedro Miguel Carneiro,Porto Suzana Almeida,de Oliveira Costa Thaís,de Oliveira Thais Ferreira,de Souza Ticiane Cavalcante,Miyajima Veridiana Pessoa,Nasr Acacia Lourenço Francisco,De la Vechia Ana Carolina,Piler Rosana Aparecida,Huggler Tatiane Motta,Fernandes Cristiano,Gomes Marcelo,Abbud Adriano,Correa Katia Oliveira,da Silva Alexandre Freitas,da Silva Neto Antonio Marinho,Docena Cássia,Dezordi Filipe Zimmer,de Lima Gustavo Barbosa,Machado Laís Ceschini,Silva Lilian Caroliny Amorim,Paiva Marcelo Henrique Santos,Bezerra Matheus Filgueira,de Lima Raul Emídio,Suzukawa Andreia Akemi,de Medeiros Oliveira Mauro,Schemberger Michelle Orane,Grinsztejn Beatriz,Brasil Patricia,Veloso Valdiléa G.,Pereira Felicidade,Teixeira Dalane Loudal Florentino,Barroso Haline,Leite Anderson Brandao,da Silva Vinicius Lemes,Bernardes André Felipe Leal,de Melo Iani Felipe Campos,Riediger Irina,Debur Maria do Carmo,Rocha Themis,Costa Andreia Santos,Silva Lindomar dos Anjos,Mattos Tirza Peixoto,Marques Ana Barjud,Mello Maximo Liana Perdigão,Viana Vania Angelica Feitosa,Rodrigues Rodrigo Ribeiro,Rovaris Darcita Buerger,Fernandes Sandra Bianchini,Lima Neto Lidio Gonçalves,Andrade Valnete,Cavalcanti Andrea Cony,Gregianini Richard Steiner Salvato Tatiana Schäffer,Galvão Jucimária Dantas,Costa Ágatha,de Lima Guerra Corado André,Nascimento Fernanda,Silva George,Pessoa Karina,Gonçalves Luciana Fé,Brandão Maria Júlia,Mejía Matilde,de Jesus Michele Silva,Nascimento Valdinete Alves,Souza Victor,da Silva Bruna Mendonça,Motta Fernando do Couto,de Macedo Carvalho Jéssica,Pinto Larissa Macedo,Vinhal Fernando,de Lucena Heráclio Morgana de Freitas Caraciolo Isabela,Silva Roberta Mendes Abreu,de Almeida Silvio Rodrigues,Silva Thayna Karoline Sousa,Magalhães Alessandro Álvares,Batista Érika Lopes Rocha,do Carmo Greice Madeleine Ikeda,Sallas Janaína,Almeida Walquiria Aparecida,Garcia Marcio,Costa Cecilia Leite,dos Santos Eduardo Ruback,Bezerra João Felipe,

Affiliation:

1. Laboratório de Vírus Respiratórios e Sarampo, Instituto Oswaldo Cruz (IOC), Fundação Oswaldo Cruz (FIOCRUZ), Rio de Janeiro, Brazil

2. Laboratório de AIDS e Imunologia Molecular, Instituto Oswaldo Cruz (IOC), Fundação Oswaldo Cruz (FIOCRUZ), Rio de Janeiro, Brazil

3. Laboratório de Ecologia de Doenças Transmissíveis da Amazônia (EDTA), Instituto Leônidas e Maria Deane, Fundação Oswaldo Cruz (FIOCRUZ), Manaus, Amazonas, Brazil

4. Laboratório de Flavivírus, Instituto Oswaldo Cruz (IOC), Fundação Oswaldo Cruz (FIOCRUZ), Rio de Janeiro, Brazil

5. Instituto Gonçalo Moniz, Fundação Oswaldo Cruz (FIOCRUZ), Salvador, Bahia, Brazil

6. Analytical Competence Molecular Epidemiology Laboratory (ACME), Fundação Oswaldo Cruz (FIOCRUZ), Fortaleza, Ceará, Brazil

7. Instituto Carlos Chagas (ICC), Fundação Oswaldo Cruz (FIOCRUZ), Curitiba, Paraná, Brazil

8. Instituto Aggeu Magalhães, Fundação Oswaldo Cruz (FIOCRUZ), Recife, Pernambuco, Brazil

9. Departamento de Biologia, Universidade Federal do Espirito Santo (UFES), Alegre, Espírito Santo, Brazil

Abstract

Amid the SARS-CoV-2 continuously changing epidemic profile, this study details the space-time dynamics of the emergence of the Delta lineage across Brazilian territories, pointing out its multiple introductions in the country and its most prevalent sublineages. Some of these sublineages have their emergence, alongside their genomic composition and geographic distribution, detailed here for the first time.

Funder

Departamento de Ciencia e Tecnologia

Fundação Carlos Chagas Filho de Amparo à Pesquisa do Estado do Rio de Janeiro

MCTI | Conselho Nacional de Desenvolvimento Científico e Tecnológico

Publisher

American Society for Microbiology

Subject

Infectious Diseases,Cell Biology,Microbiology (medical),Genetics,General Immunology and Microbiology,Ecology,Physiology

Link

https://journals.asm.org/doi/pdf/10.1128/spectrum.02641-21

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