Trophic Specialization Results in Genomic Reduction in Free-Living Marine Idiomarina Bacteria

Author:

Qin Qi-Long1,Li Yi1,Sun Lin-Lin1,Wang Zhi-Bin1,Wang Shi2,Chen Xiu-Lan13,Oren Aharon4,Zhang Yu-Zhong123

Affiliation:

1. State Key Laboratory of Microbial Technology, Marine Biotechnology Research Center, Shandong University, Qingdao, China

2. College of Marine Life Sciences, Ocean University of China, Qingdao, China

3. Laboratory for Marine Biology and Biotechnology, Qingdao National Laboratory for Marine Science and Technology, Qingdao, China

4. Department of Plant and Environmental Sciences, The Alexander Silberman Institute of Life Sciences, Edmond J. Safra Campus, The Hebrew University of Jerusalem, Jerusalem, Israel

Abstract

The streamlining hypothesis is usually used to explain the genomic reduction events in free-living bacteria like SAR11. However, we find that the genomic reduction phenomenon in the bacterial genus Idiomarina is different from that in SAR11. Therefore, we propose a new hypothesis to explain genomic reduction in this genus based on trophic specialization that could result in genomic reduction, which would be not uncommon in nature. Not only can the trophic specialization hypothesis explain the genomic reduction in the genus Idiomarina , but it also sheds new light on our understanding of the genomic reduction processes in other free-living bacterial lineages.

Funder

China National Key Research and Development Program

National Science Foundation of China

Young Scholars Program of Shandong University

Program of Shadong for Taishan Scholars

AoShan Talents Cultivation Program

Publisher

American Society for Microbiology

Subject

Virology,Microbiology

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