Complete and Draft Genome Sequences of 12 Plant-Associated Rathayibacter Strains of Known and Putative New Species-Reference-Cited by-同舟云学术

Complete and Draft Genome Sequences of 12 Plant-Associated Rathayibacter Strains of Known and Putative New Species

Published:2020-05-28 Issue:22 Volume:9 Page:
ISSN:2576-098X
Container-title:Microbiology Resource Announcements
language:en
Short-container-title:Microbiol Resour Announc

Author:

Tarlachkov Sergey V.¹²^ORCID,Starodumova Irina P.¹,Dorofeeva Lubov V.¹,Prisyazhnaya Natalia V.¹,Leyn Semen A.³⁴,Zlamal Jaime E.³,Elane Marinela L.³,Osterman Andrei L.³,Nadler Steven A.⁵,Subbotin Sergei A.⁶,Evtushenko Lyudmila I.¹

Affiliation:

1. All-Russian Collection of Microorganisms (VKM), G. K. Skryabin Institute of Biochemistry and Physiology of Microorganisms, Pushchino Scientific Center for Biological Research of the Russian Academy of Sciences, Pushchino, Russia

2. Branch of Shemyakin and Ovchinnikov Institute of Bioorganic Chemistry of the Russian Academy of Sciences, Pushchino, Russia

3. Infectious and Inflammatory Disease Center, Sanford Burnham Prebys Medical Discovery Institute, La Jolla, California, USA

4. A. A. Kharkevich Institute for Information Transmission Problems, Russian Academy of Sciences, Moscow, Russia

5. Department of Entomology and Nematology, University of California, Davis, California, USA

6. California Department of Food and Agriculture, Sacramento, California, USA

Abstract

Complete and draft genome sequences of 12 Rathayibacter strains were generated using Oxford Nanopore and Illumina technologies. The genome sizes of these strains are 3.21 to 4.61 Mb, with high G+C content (67.2% to 72.7%) genomic DNA. Genomic data will provide useful baseline information for natural taxonomy and comparative genomics of members of the genus Rathayibacter .

Funder

Sanford Burnham Prebys Medical Discovery Institute

USDA | Animal and Plant Health Inspection Service

Publisher

American Society for Microbiology

Subject

Genetics,Immunology and Microbiology (miscellaneous),Molecular Biology

Link

https://journals.asm.org/doi/pdf/10.1128/MRA.00316-20

Reference22 articles.

1. Rathayibacter gen. nov., Including the Species Rathayibacter rathayi comb. nov., Rathayibacter tritici comb. nov., Rathayibacter iranicus comb. nov., and Six Strains from Annual Grasses

2. Taxonomic significance of 2,4-diaminobutyric acid isomers in the cell wall peptidoglycan of actinomycetes and reclassification of Clavibacter toxicus as Rathayibacter toxicus comb. nov.

3. Rathayibacter caricis sp. nov. and Rathayibacter festucae sp. nov., isolated from the phyllosphere of Carex sp. and the leaf gall induced by the nematode Anguina graminis on Festuca rubra L., respectively.

4. Evtushenko LI, Dorofeeva LV. 2012. Genus XXII. Rathayibacter Zgurskaya, Evtushenko, Akimov and Kalakoutskii 1993, 147, p 953–964. In Goodfellow M, Kämpfer P, Busse H-J, Trujillo ME, Suzuki K-I, Ludwig W, Whitman WB (ed), Bergey’s manual of systematic bacteriology, 2nd ed, vol 5. Springer, New York, NY.

5. Rathayibacter oskolensis sp. nov., a novel actinobacterium from Androsace koso-poljanskii Ovcz. (Primulaceae) endemic to the Central Russian Upland

Cited by 10 articles. 订阅此论文施引文献订阅此论文施引文献，注册后可以免费订阅5篇论文的施引文献，订阅后可以查看论文全部施引文献

1. Rathayibacter tanaceti sp. nov., a Novel Actinobacterium from Tanacetum vulgare Infested by Foliar Nematode Aphelenchoides sp.;Current Microbiology;2024-03-27

2. Cell Wall Glycopolymers as Chemotaxonomic Characteristics of the Genus and Species Rathayibacter;Microbiology;2023-12

3. High-temperature stress induces bacteria-specific adverse and reversible effects on Ulva (Chlorophyta) growth and its chemosphere in a reductionist model system;Botanica Marina;2023-10-27

4. Draft Genome Sequences of 9 Actinobacteria from the Family Microbacteriaceae Associated with Insect- and Nematode-Damaged Plants;Microbiology Resource Announcements;2022-10-20

5. Comparative Secretome Analyses of Toxigenic and Atoxigenic Rathayibacter Species;Phytopathology®;2021-09