Metagenome-Assembled Genomes from Photo-Oxidized and Nonoxidized Oil-Degrading Marine Microcosms-Reference-Cited by-同舟云学术

Metagenome-Assembled Genomes from Photo-Oxidized and Nonoxidized Oil-Degrading Marine Microcosms

Published:2023-06-20 Issue:6 Volume:12 Page:
ISSN:2576-098X
Container-title:Microbiology Resource Announcements
language:en
Short-container-title:Microbiol Resour Announc

Author:

Barnes Shelby J.¹,Althouse Raven C.²,Costa Bianca F.²,Hu Boyan¹,Kovalev Maxim¹,Kulik Timur¹,Lee Yu-Tung¹,Moore Meredith C.¹,Peng Emily¹,Pook Jing Yao¹,Sharma Akshita¹,Wood Celia¹,Webb Eric A.¹^ORCID,Sterling Hannah³⁴,Aeppli Christoph⁴,Thrash J. Cameron¹^ORCID

Affiliation:

1. Department of Biological Sciences, University of Southern California, Los Angeles, California, USA

2. Department of Civil and Environmental Engineering, University of Southern California, Los Angeles, California, USA

3. Department of Biology, Marine Biology, and Environmental Science, Roger Williams University, Bristol, Rhode Island, USA

4. Bigelow Laboratory for Ocean Sciences, East Boothbay, Maine, USA

Abstract

We performed deep metagenomic sequencing on hydrocarbon-degrading marine microcosms designed to experimentally determine the effect of photo-oxidation on oil biodegradation dynamics. Assembly, binning, and dereplication yielded 73 unique metagenome-assembled genomes (MAGs) from 6 phyla, of which 61 are predicted to be over 90% complete.

Funder

National Academies of Sciences, Engineering, and Medicine

Publisher

American Society for Microbiology

Subject

Genetics,Immunology and Microbiology (miscellaneous),Molecular Biology

Link

https://journals.asm.org/doi/pdf/10.1128/mra.00210-23

Reference22 articles.

1. The first decade of scientific insights from the Deepwater Horizon oil release

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3. Responses of Microbial Communities to Hydrocarbon Exposures

4. Recent advance in understanding photooxidation of hydrocarbons after oil spills

5. Temporal chemical composition changes in water below a crude oil slick irradiated with natural sunlight

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