Charting Shifts in Saccharomyces cerevisiae Gene Expression across Asynchronous Time Trajectories with Diffusion Maps-Reference-Cited by-同舟云学术

Charting Shifts in Saccharomyces cerevisiae Gene Expression across Asynchronous Time Trajectories with Diffusion Maps

Published:2021-10-26 Issue:5 Volume:12 Page:
ISSN:2150-7511
Container-title:mBio
language:en
Short-container-title:mBio

Author:

Reiter Taylor¹²³^ORCID,Montpetit Rachel²,Runnebaum Ron²⁴^ORCID,Brown C. Titus³^ORCID,Montpetit Ben¹²^ORCID

Affiliation:

1. Food Science Graduate Group, University of California—Davis, Davis, California, USA

2. Department of Viticulture and Enology, University of California—Davis, Davis, California, USA

3. Department of Population Health and Reproduction, University of California—Davis, Davis, California, USA

4. Department of Chemical Engineering, University of California—Davis, Davis, California, USA

Abstract

In this work, Saccharomyces cerevisiae gene expression was used as a biosensor to capture differences across and between fermentations of Pinot noir grapes from 15 unique sites representing eight American Viticultural Areas. This required development of a novel analysis method, DMap-DE, for investigation of asynchronous gene expression data.

Funder

Gordon and Betty Moore Foundation

HHS | NIH | National Institute of General Medical Sciences

Publisher

American Society for Microbiology

Subject

Virology,Microbiology

Link

https://journals.asm.org/doi/pdf/10.1128/mBio.02345-21

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