Complete Genome Sequence of a New Tobamovirus Naturally Infecting Tomatoes in Mexico-Reference-Cited by-同舟云学术

Complete Genome Sequence of a New Tobamovirus Naturally Infecting Tomatoes in Mexico

Published:2013-10-31 Issue:5 Volume:1 Page:
ISSN:2169-8287
Container-title:Genome Announcements
language:en
Short-container-title:Genome Announc

Author:

Li Rugang¹,Gao Shan²,Fei Zhangjun²³,Ling Kai-Shu¹

Affiliation:

1. USDA–Agricultural Research Service, U.S. Vegetable Laboratory, Charleston, South Carolina, USA

2. Boyce Thompson Institute for Plant Research, Cornell University, Ithaca, New York, USA

3. USDA–Agricultural Research Service, Robert W. Holley Center for Agriculture and Health, Ithaca, New York, USA

Abstract

ABSTRACT The complete genomic sequence of a new tobamovirus in tomatoes was determined through deep sequencing and assembly of small RNAs, then validated through Sanger sequencing. Based on the low sequence identity (≤85%) to known viruses and a close phylogenetic relationship to tobamoviruses, it was identified as a new species.

Publisher

American Society for Microbiology

Subject

Genetics,Molecular Biology

Link

https://journals.asm.org/doi/pdf/10.1128/genomeA.00794-13

Reference5 articles.

1. Virgaviridae: a new family of rod-shaped plant viruses

2. Molecular and biological properties of tomato necrotic stunt virus and development of a sensitive real-time RT-PCR assay

3. A cost-effective method for Illumina small RNA-Seq library preparation using T4 RNA ligase 1 adenylated adapters

4. Deep Sequencing of Small RNAs in Tomato for Virus and Viroid Identification and Strain Differentiation

5. Virgaviridae

Cited by 52 articles. 订阅此论文施引文献订阅此论文施引文献，注册后可以免费订阅5篇论文的施引文献，订阅后可以查看论文全部施引文献

1. A Synoptic Review of Plant Disease Epidemics and Outbreaks Published in 2022;Phytopathology®;2024-08

2. Molecular characterization and host reaction to tomato mottle mosaic virus isolated from sweet pepper seeds in Japan;Archives of Virology;2024-04-30

3. Transcriptome Analysis of Tomato Leaves Reveals Candidate Genes Responsive to Tomato Brown Rugose Fruit Virus Infection;International Journal of Molecular Sciences;2024-04-04

4. Emergence, diversity, and epidemiological prospects of viruses infecting tomato crops;Viral Diseases of Field and Horticultural Crops;2024

5. Tobamoviruses: old and new threats to tomato cultivation;Journal of General Plant Pathology;2023-08-14