Complete Genome Sequence of a Porcine Epidemic Diarrhea Virus Strain from Vietnam, HUA-14PED96, with a Large Genomic Deletion-Reference-Cited by-同舟云学术

Complete Genome Sequence of a Porcine Epidemic Diarrhea Virus Strain from Vietnam, HUA-14PED96, with a Large Genomic Deletion

Published:2016-02-25 Issue:1 Volume:4 Page:
ISSN:2169-8287
Container-title:Genome Announcements
language:en
Short-container-title:Genome Announc

Author:

Choe Se-Eun¹,Park Kee-Hwan¹,Lim Seong-In¹,Le Van Phan²,Hien Nguyen Ba²,Thach Pham Ngoc²,Phuong Le Huynh Thanh²,An Byung-Hyun³,Han Song Hee¹,Cho In-Soo¹,An Dong-Jun¹

Affiliation:

1. Animal and Plant Quarantine Agency, Anyang, Gyeonggi-do, Republic of Korea

2. College of Veterinary Medicine, Vietnam National University of Agriculture (VNUA), Hanoi, Vietnam

3. Applied Chemistry and Biological Engineering, Ajou University, Suwon, Republic of Korea

Abstract

ABSTRACT A highly virulent strain of Porcine epidemic diarrhea virus (PEDV) causing severe diarrhea has recently emerged in Vietnam. Genomic sequences from a novel strain, HUA-14PED96, isolated from a Vietnamese piglet with serious diarrhea show relatively high identity with U.S.-like PEDV strains, and have a 72-nt deletion in the open reading frame 1a (ORF1a) gene.

Publisher

American Society for Microbiology

Subject

Genetics,Molecular Biology

Link

https://journals.asm.org/doi/pdf/10.1128/genomeA.00002-16

Reference8 articles.

1. Sequence determination of the nucleocapsid protein gene of the porcine epidemic diarrhoea virus confirms that this virus is a coronavirus related to human coronavirus 229E and porcine transmissible gastroenteritis virus

2. A new coronavirus-like particle associated with diarrhea in swine

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4. Distinct Characteristics and Complex Evolution of PEDV Strains, North America, May 2013–February 2014

5. New Variant of Porcine Epidemic Diarrhea Virus, United States, 2014

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