Small Circular Rep-Encoding Single-Stranded DNA Genomes in Peruvian Diarrhea Virome-Reference-Cited by-同舟云学术

Small Circular Rep-Encoding Single-Stranded DNA Genomes in Peruvian Diarrhea Virome

Published:2017-09-21 Issue:38 Volume:5 Page:
ISSN:2169-8287
Container-title:Genome Announcements
language:en
Short-container-title:Genome Announc

Author:

Altan Eda¹²,Del Valle Mendoza Juana³⁴,Deng Xutao¹²,Phan Tung G.¹²,Sadeghi Mohammadreza¹²⁵,Delwart Eric L.¹²^ORCID

Affiliation:

1. Blood Systems Research Institute, San Francisco, California, USA

2. Department of Laboratory Medicine, University of California at San Francisco, San Francisco, California, USA

3. School of Medicine, Research and Innovation Centre of the Faculty of Health Sciences, Universidad Peruana de Ciencias Aplicadas, Lima, Peru

4. Instituto de Investigación Nutricional, Lima, Peru

5. Department of Virology, University of Helsinki, Helsinki, Finland

Abstract

ABSTRACT Metagenomic analysis of diarrhea samples revealed the presence of numerous human enteric viruses and small circular Rep-encoding single-stranded DNA (CRESS-DNA) genomes. One such genome was related to smacoviruses, while eight others were related to genomes reported in the feces of different mammals. The tropism of these CRESS-DNA viruses remains unknown.

Publisher

American Society for Microbiology

Subject

Genetics,Molecular Biology

Link

https://journals.asm.org/doi/pdf/10.1128/genomeA.00822-17

Reference15 articles.

1. Comparing viral metagenomics methods using a highly multiplexed human viral pathogens reagent

2. An ensemble strategy that significantly improves de novo assembly of microbial genomes from metagenomic next-generation sequencing data

3. A novel genus in the order Picornavirales detected in human stool

4. Viral nucleic acids in human plasma pools

5. Diverse circular ssDNA viruses discovered in dragonflies (Odonata: Epiprocta)

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