High-Resolution Typing by Integration of Genome Sequencing Data in a Large Tuberculosis Cluster-Reference-Cited by-同舟云学术

High-Resolution Typing by Integration of Genome Sequencing Data in a Large Tuberculosis Cluster

Published:2010-09 Issue:9 Volume:48 Page:3403-3406
ISSN:0095-1137
Container-title:Journal of Clinical Microbiology
language:en
Short-container-title:J Clin Microbiol

Author:

Schürch Anita C.¹²,Kremer Kristin¹,Daviena Olaf¹,Kiers Albert³,Boeree Martin J.⁴,Siezen Roland J.²,van Soolingen Dick¹⁴

Affiliation:

1. Tuberculosis Reference Laboratory, National Institute for Public Health and the Environment (RIVM), Centre for Infectious Disease Control, P.O. Box 1, 3720 BA Bilthoven, Netherlands

2. Radboud University Nijmegen Medical Centre/NCMLS, Centre for Molecular and Biomolecular Informatics, P.O. Box 9101, 6500 HB Nijmegen, Netherlands

3. Department of Tuberculosis Control GGD Fryslân, P.O. Box 601, 8901 BK Leeuwarden, Netherlands

4. University Centre for Chronic Diseases, Department of Pulmonary Disease, Department of Medical Microbiology, Radboud University Nijmegen Medical Centre, P.O. Box 9101, 6500 HB Nijmegen, Netherlands

Abstract

ABSTRACT To investigate whether genome sequencing yields more useful markers than those currently used to study the epidemiology of tuberculosis, it was applied to three Mycobacterium tuberculosis isolates of the Harlingen outbreak. Our findings suggest that single nucleotide polymorphisms can be used to identify transmission chains in restriction fragment length polymorphism clusters.

Publisher

American Society for Microbiology

Subject

Microbiology (medical)

Link

https://journals.asm.org/doi/pdf/10.1128/JCM.00370-10

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