The Global Virome in One Network (VIRION): an Atlas of Vertebrate-Virus Associations

Author:

Carlson Colin J.123ORCID,Gibb Rory J.45,Albery Gregory F.3,Brierley Liam6ORCID,Connor Ryan P.7,Dallas Tad A.89,Eskew Evan A.10,Fagre Anna C.1112,Farrell Maxwell J.13,Frank Hannah K.14,Muylaert Renata L.15,Poisot Timothée1617,Rasmussen Angela L.218ORCID,Ryan Sadie J.192021ORCID,Seifert Stephanie N.22

Affiliation:

1. Department of Microbiology and Immunology, Georgetown University Medical Center, Georgetown University, Washington, DC, USA

2. Center for Global Health Science and Security, Georgetown University Medical Center, Georgetown University, Washington, DC, USA

3. Department of Biology, Georgetown University, Washington, DC, USA

4. Centre for Mathematical Modelling of Infectious Diseases, London School of Hygiene and Tropical Medicine, London, United Kingdom

5. Centre on Climate Change and Planetary Health, London School of Hygiene and Tropical Medicine, London, United Kingdom

6. Department of Health Data Science, University of Liverpool, Liverpool, United Kingdom

7. National Center for Biotechnology Information, U.S. National Library of Medicine, National Institutes of Health, Bethesda, Maryland, USA

8. Department of Biological Sciences, Louisiana State University, Baton Rouge, Louisiana, USA

9. Department of Biological Sciences, University of South Carolina, Columbia, South Carolina, USA

10. Department of Biology, Pacific Lutheran University, Tacoma, Washington, USA

11. Department of Microbiology, Immunology, and Pathology, Colorado State University, Fort Collins, Colorado, USA

12. Bat Health Foundation, Fort Collins, Colorado, USA

13. Department of Ecology & Evolutionary Biology, University of Toronto, Toronto, Ontario, Canada

14. Department of Ecology and Evolutionary Biology, Tulane University, New Orleans, Louisiana, USA

15. Molecular Epidemiology and Public Health Laboratory, Hopkirk Research Institute, Massey University, Palmerston North, New Zealand

16. Département de Sciences Biologiques, Université de Montréal, Montréal, Quebec, Canada

17. Québec Centre for Biodiversity Science, Montréal, Quebec, Canada

18. Vaccine and Infectious Disease Organization, University of Saskatchewan, Saskatoon, Saskatchewan, Canada

19. Department of Geography, University of Florida, Gainesville, Florida, USA

20. Emerging Pathogens Institute, University of Florida, Gainesville, Florida, USA

21. School of Life Sciences, University of KwaZulu-Natal, Durban, South Africa

22. Paul G. Allen School of Global Health, Washington State University, Pullman, Washington, USA

Abstract

Animals and their viruses are connected by a sprawling, tangled network of species interactions. Data on the host-virus network are available from several sources, which use different naming conventions and often report metadata in different levels of detail.

Funder

National Science Foundation

Publisher

American Society for Microbiology

Subject

Virology,Microbiology

Reference34 articles.

1. Global estimates of mammalian viral diversity accounting for host sharing

2. Influenza

3. West Nile Virus and Wildlife Health

4. POOR REPLICATION OF WEST NILE VIRUS (NEW YORK 1999 STRAIN) IN THREE REPTILIAN AND ONE AMPHIBIAN SPECIES

5. Poisot T Ouellet M-A Mollentze N Farrell MJ Becker DJ Albery GF Gibb RJ Seifert SN Carlson CJ. 2021. Imputing the mammalian virome with linear filtering and singular value decomposition. arXiv [q-bioQM]. https://arxiv.org/abs/2105.14973.

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