Captive Common Marmosets (Callithrix jacchus) Are Colonized throughout Their Lives by a Community of Bifidobacterium Species with Species-Specific Genomic Content That Can Support Adaptation to Distinct Metabolic Niches

Author:

Zhu Lifeng12ORCID,Yang Qinnan23,Suhr Van Haute Mallory J.23,Kok Car Reen23,Gomes-Neto Joao Carlos23,Pavlovikj Natasha24,Pillai Resmi3,Sinha Rohita23,Hassenstab Haley1,Mustoe Aaryn1,Moriyama Etsuko N.256,Hutkins Robert23,French Jeffrey12ORCID,Benson Andrew K.23

Affiliation:

1. Department of Biology, University of Nebraska—Omaha, Omaha, Nebraska, USA

2. Nebraska Food for Health Center, University of Nebraska—Lincoln, Lincoln, Nebraska, USA

3. Department of Food Science and Technology, University of Nebraska—Lincoln, Lincoln, Nebraska, USA

4. Department of Computer Science and Engineering, University of Nebraska—Lincoln, Lincoln, Nebraska, USA

5. School of Biological Sciences, University of Nebraska—Lincoln, Lincoln, Nebraska, USA

6. Center for Plant Science Innovation, University of Nebraska—Lincoln, Lincoln, Nebraska, USA

Abstract

Bifidobacterium species are recognized as important, beneficial microbes in the human gut microbiome, and their ability colonize individuals at different stages of life is influenced by poorly understood interactions between host, dietary, environmental, and ecological factors. The common marmoset is an emerging nonhuman primate model with a short maturation period, making this model amenable to study of the microbiome throughout a life history.

Funder

The Jeff and Tricia Raikes Foundation

Publisher

American Society for Microbiology

Subject

Virology,Microbiology

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