Draft Genome Sequence of Psychrobacter okhotskensis Strain 5179-1A, Isolated from a Raw Cured Ham Storage Crate-Reference-Cited by-同舟云学术

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Draft Genome Sequence of Psychrobacter okhotskensis Strain 5179-1A, Isolated from a Raw Cured Ham Storage Crate

Published:2020-07-16 Issue:29 Volume:9 Page:
ISSN:2576-098X
Container-title:Microbiology Resource Announcements
language:en
Short-container-title:Microbiol Resour Announc

Author:

Wambui Joseph¹^ORCID,Morach Marina¹,Cernela Nicole¹,Stevens Marc J. A.¹,Ghielmetti Giovanni¹,Stephan Roger¹^ORCID

Affiliation:

1. Institute for Food Safety and Hygiene, Vetsuisse Faculty, University of Zurich, Zurich, Switzerland

Abstract

We present the draft genome sequence of Psychrobacter okhotskensis strain 5179-1A, which was isolated from a raw cured ham storage crate. Its size and GC content are 3.4 Mb and 43.4%, respectively. The 16S rRNA sequences of strain 5179-1A and P. okhotskensis MD17 T are 100% identical.

Publisher

American Society for Microbiology

Subject

Genetics,Immunology and Microbiology (miscellaneous),Molecular Biology

Link

https://journals.asm.org/doi/pdf/10.1128/MRA.00682-20

Reference15 articles.

1. Psychrobacter okhotskensis sp. nov., a lipase-producing facultative psychrophile isolated from the coast of the Okhotsk Sea

2. Phylogenetic diversity of culturable bacteria from Antarctic sandy intertidal sediments

3. Psychrobacter immobilis isolated from foods: characteristics and identification

4. Andrews S. 2010. FastQC: a quality control tool for high throughput sequence data. https://www.bioinformatics.babraham.ac.uk/projects/fastqc.

5. SPAdes: A New Genome Assembly Algorithm and Its Applications to Single-Cell Sequencing

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