A Third Transposable Element, IS Ppu12 , from the Toluene-Xylene Catabolic Plasmid pWW0 of Pseudomonas putida mt-2

Abstract

ABSTRACT A 3,372-bp insertion sequence, IS Ppu12 , has been identified on the archetypal toluene-xylene TOL catabolic plasmid pWW0 from Pseudomonas putida mt-2. The insertion sequence element is located on the plasmid between bases 84397 and 87768 in a region which also contains the termini and transposase genes of the catabolic transposons Tn 4651 and Tn 4653 (A. Greated, L. Lambertson, P. A. Williams, and C. M. Thomas, Environ. Microbiol., in press). IS Ppu12 has terminal inverted repeats of 24 bp with three mismatches and contains four open reading frames, a tnpA homologue and three open reading frames ( lspA , orf1 , and orf2) of undetermined function. After insertion in vitro of a Km r cassette into IS Ppu12 either in the intergenic region between orf1 and orf2 or directly into the orf1 gene and ligation into a suicide vector, the modified IS Ppu12 -Km transposes at high frequency, often in multiple copies, into the chromosome of a P. putida recipient. Inactivation of lspA , orf1 , and orf2 by introducing a 7-bp deletion into the 5′ region of each gene had no major effect upon transposition, but a similar mutation of tnpA completely eliminated transposition. Analysis of the literature and of strains derived from the chlorobenzoate-degrading Pseudomonas sp. strain B13 suggests that the promiscuity of this element has played an important role in the history of plasmid pWW0. Database comparisons and the accompanying paper (A. J. Weightman, A. W. Topping, K. E. Hill, L. L. Lee, K. Sakai, J. H. Slater, and A. W. Thomas, J. Bacteriol. 184:6581-6591, 2002) show that IS Ppu12 is a transposable element also found in other bacteria.