Whole community shotgun metagenomes of two biological soil crust types from the Mojave Desert-Reference-Cited by-同舟云学术

Whole community shotgun metagenomes of two biological soil crust types from the Mojave Desert

Published:2024-03-12 Issue:3 Volume:13 Page:
ISSN:2576-098X
Container-title:Microbiology Resource Announcements
language:en
Short-container-title:Microbiol Resour Announc

Author:

Nguyen Thuy M.¹^ORCID,Pombubpa Nuttapon²^ORCID,Huntemann Marcel³^ORCID,Clum Alicia³^ORCID,Foster Brian³,Foster Bryce³,Roux Simon³^ORCID,Palaniappan Krishnaveni³,Varghese Neha³^ORCID,Mukherjee Supratim³^ORCID,Reddy T. B. K.³^ORCID,Daum Chris³^ORCID,Copeland Alex³^ORCID,Chen I-Min A.³^ORCID,Ivanova Natalia N.³^ORCID,Kyrpides Nikos C.³^ORCID,Harmon-Smith Miranda³^ORCID,Eloe-Fadrosh Emiley A.³^ORCID,Pietrasiak Nicole⁴^ORCID,Stajich Jason E.²^ORCID,Hom Erik F. Y.¹^ORCID

Affiliation:

1. Department of Biology and Center for Biodiversity and Conservation Research, University of Mississippi, University, Mississippi, USA

2. Department of Microbiology and Plant Pathology, University of California, Riverside, California, USA

3. US Department of Energy Joint Genome Institute, Lawrence Berkeley National Laboratory, Berkeley, California, USA

4. School of Life Sciences, University of Nevada-Las Vegas, Las Vegas, Nevada, USA

Abstract

ABSTRACT We present six whole community shotgun metagenomic sequencing data sets of two types of biological soil crusts sampled at the ecotone of the Mojave Desert and Colorado Desert in California. These data will help us understand the diversity and function of biocrust microbial communities, which are essential for desert ecosystems.

Funder

National Science Foundation

U.S. Department of Energy

Joint Genome Institute

National Energy Research Scientific Computing Center

U.S. Department of Agriculture

Royal Thai Government

Publisher

American Society for Microbiology

Link

https://journals.asm.org/doi/pdf/10.1128/mra.00980-23

Reference6 articles.

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5. metaSPAdes: a new versatile metagenomic assembler