Detection and Genomic Characterization of an Avian Influenza Virus Subtype H5N1 (Clade 2.3.4.4b) Strain Isolated from a Pelican in Peru-Reference-Cited by-同舟云学术

Detection and Genomic Characterization of an Avian Influenza Virus Subtype H5N1 (Clade 2.3.4.4b) Strain Isolated from a Pelican in Peru

Published:2023-06-20 Issue:6 Volume:12 Page:
ISSN:2576-098X
Container-title:Microbiology Resource Announcements
language:en
Short-container-title:Microbiol Resour Announc

Author:

Fernández-Díaz Manolo¹,Villanueva-Pérez Doris¹,Tataje-Lavanda Luis¹²^ORCID,Montalvan-Avalos Angela¹,Isasi-Rivas Gisela¹,Lulo-Vargas Milagros¹,Fernández-Sánchez Manolo¹

Affiliation:

1. Laboratorios de Investigación y Desarrollo, Farmacológicos Veterinarios S.A.C. (FARVET SAC), Chincha Alta, Ica, Peru

2. Escuela Profesional de Medicina Humana, Universidad Privada San Juan Bautista, Lima, Peru

Abstract

Surveillance helps us identify and monitor strains with zoonotic potential. A tracheal swab from a pelican on a Peruvian beach was H5N1 positive (clade 2.3.4.4b) using Oxford Nanopore’s MinION platform. The near-complete genome sequence of strain VFAR-140 will aid us in understanding avian influenza epidemiology and spread.

Publisher

American Society for Microbiology

Subject

Genetics,Immunology and Microbiology (miscellaneous),Molecular Biology

Link

https://journals.asm.org/doi/pdf/10.1128/mra.00199-23

Reference26 articles.

1. Characterization of a highly pathogenic H5N1 influenza virus derived from bar-headed geese in China

2. Avian influenza spread and seabird movements between colonies

3. Avian Influenza Virus Detection and Quantitation by Real-Time RT-PCR

4. Detection of Infectious Laryngotracheitis Virus by Real-Time PCR in Naturally and Experimentally Infected Chickens

5. Characterization of Newcastle disease virus isolates by reverse transcription PCR coupled to direct nucleotide sequencing and development of sequence database for pathotype prediction and molecular epidemiological analysis

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