Chromosome and Plasmid Sequences of <i>Pantoea</i> sp. Strain SOD02 Isolated from an Urban Freshwater Stream-Reference-Cited by-同舟云学术

Chromosome and Plasmid Sequences of Pantoea sp. Strain SOD02 Isolated from an Urban Freshwater Stream

Published:2022-10-20 Issue:10 Volume:11 Page:
ISSN:2576-098X
Container-title:Microbiology Resource Announcements
language:en
Short-container-title:Microbiol Resour Announc

Author:

Abaherah Ibrahim¹,Almonte Geraldine¹,Donohue Kathryn¹,Furey Daniel¹,Garvey Kathleen¹,Joyal Jacqueline¹,Luden Devyn¹,Mulvey Kathryn¹,O’Donnell Sean¹,Pitre Nina¹,Rexach Aura¹,Sheehan Kiley¹,Williams Laura E.¹^ORCID

Affiliation:

1. Department of Biology, Providence College, Providence, Rhode Island, USA

Abstract

After isolating Pantoea sp. strain SOD02 from an urban freshwater stream in Providence, RI, we used PacBio RSII data for de novo assembly and Illumina MiSeq data for polishing. This yielded complete circular sequences for a 4,227,027-bp chromosome with 54.7% GC and a 926,844-bp plasmid with 54.0% GC.

Funder

HHS | National Institutes of Health

Publisher

American Society for Microbiology

Subject

Genetics,Immunology and Microbiology (miscellaneous),Molecular Biology

Link

https://journals.asm.org/doi/pdf/10.1128/mra.00822-22

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