Complete genome sequence of <i>Paenibacillus</i> sp. VCA1 isolated from crater lake of the El Chichón Volcano-Reference-Cited by-同舟云学术

Complete genome sequence of Paenibacillus sp. VCA1 isolated from crater lake of the El Chichón Volcano

Published:2023-11-16 Issue:11 Volume:12 Page:
ISSN:2576-098X
Container-title:Microbiology Resource Announcements
language:en
Short-container-title:Microbiol Resour Announc

Author:

Martínez-López Nancy Abril¹^ORCID,Peña-Ocaña Betsy Anaid²,García-Contreras Rodolfo³,Maeda Toshinari⁴,Rincón-Rosales Reiner¹,Cazares Adrián⁵⁶,Hoshiko Yuki⁴⁷,Ruíz-Valdiviezo Víctor Manuel¹^ORCID

Affiliation:

1. Laboratorio de Biología Molecular, Tecnológico Nacional de México/Instituto Tecnológico de Tuxtla Gutiérrez , Carretera Panamericana ,Tuxtla Gutiérrez, Chiapas, México

2. Departamento de Bioquímica, Instituto Nacional de Cardiología, Juan Badiano, Colonia Sección XVI , Tlalpan, Mexico City, Mexico

3. Departamento de Microbiología y Parasitología, Facultad de Medicina, Universidad Nacional Autónoma de México , Mexico City, México

4. Department of Biological Functions Engineering, Kyushu Institute of Technology , Kitakyushu, Fukuoka, Japan

5. EMBL's European Bioinformatics Institute (EMBL-EBI), Wellcome Genome Campus , Cambridge, Massachusetts, United Kingdom

6. Wellcome Sanger Institute, Wellcome Genome Campus , Cambridge, Massachusetts, United Kingdom

7. Division of Microbiology, Department of Infectious Medicine, Kurume University School of Medicine, Asahi-Machi , Kurume-City, Fukuoka, Japan

Abstract

ABSTRACT We report the complete genome of Paenibacillus sp. strain VCA1, which was isolated from sediment from El Chichón Volcano. This genome consists of 6,690,819 bp and 6,312 coding sequences, with 51.8% G+C content. Whole-genome sequencing was performed to explore the strain’s biocontrol and plant growth promotion properties.

Funder

Tecnológico Nacional de México

Consejo Nacional de Humanidades, Ciencias y Tecnologías

Publisher

American Society for Microbiology

Subject

Genetics,Immunology and Microbiology (miscellaneous),Molecular Biology

Link

https://journals.asm.org/doi/pdf/10.1128/mra.00583-23

Reference16 articles.

1. Identification of bacterial communities in extreme sites of Pakistan using high throughput barcoded amplicon sequencing

2. Genome Mining and Characterization of Biosynthetic Gene Clusters in Two Cave Strains of Paenibacillus sp.

3. Paenibacillusstrains with nitrogen fixation and multiple beneficial properties for promoting plant growth

4. Inorganic Phosphate Solubilization by Rhizosphere Bacterium Paenibacillus sonchi: Gene Expression and Physiological Functions

5. Draft Genome Sequence of Paenibacillus sonchi IIRRBNF1, a Nitrogen-Fixing and Plant Growth-Promoting Bacterium Isolated from Rice Rhizosphere