Analysis of the Microbial Community Structure in Coastal Sediment of an Ascidian Farm in South Korea through 16S rRNA Gene Amplicon Sequencing-Reference-Cited by-同舟云学术

Analysis of the Microbial Community Structure in Coastal Sediment of an Ascidian Farm in South Korea through 16S rRNA Gene Amplicon Sequencing

Published:2021-07-29 Issue:30 Volume:10 Page:
ISSN:2576-098X
Container-title:Microbiology Resource Announcements
language:en
Short-container-title:Microbiol Resour Announc

Author:

Jeong Ilwon¹,Kim Jong-Oh²,Yoon Seokjin³,Kim Kyunghoi¹^ORCID

Affiliation:

1. Department of Ocean Engineering, Pukyong National University, Busan, Republic of Korea

2. Institute of Marine Biotechnology, Pukyong National University, Busan, Republic of Korea

3. Dokdo Fisheries Research Center, National Institute of Fisheries Science, Pohang, Republic of Korea

Abstract

Aquaculture places contamination pressure on the coastal environment. We investigated the microbial community structure changes in sediment in an ascidian Styela clava farm. Data profiling of the 16S rRNA gene amplicon sequence shows that the microbial diversity of sediment in the Styela clava farm is dominated by Proteobacteria phyla (relative abundance, 95.34 to 97.85%).

Funder

National Research Foundation of Korea

National Institute of Fisheries Science

Publisher

American Society for Microbiology

Subject

Genetics,Immunology and Microbiology (miscellaneous),Molecular Biology

Link

https://journals.asm.org/doi/pdf/10.1128/MRA.00584-21

Reference5 articles.

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2. National Fisheries Research and Development Institute. 2013. The development of suitable sites selection and rearrangement technology for warty sea squirt aquaculture. National Fisheries Research and Development Institute, Busan, South Korea.

3. Suitable Site Assessment using Habitat Suitability Index for Styela Clava and Styela Plicata in Jindong Bay

4. Bacterial Diversity Profiling around the Orca Seamount in the Bransfield Strait, Antarctica, Based on 16S rRNA Gene Amplicon Sequences

5. 16S rRNA Gene Diversity in the Salt Crust of Salar de Uyuni, Bolivia, the World’s Largest Salt Flat

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