IS 1245 Restriction Fragment Length Polymorphism Typing of Mycobacterium avium Isolates: Proposal for Standardization

Author:

van Soolingen Dick1,Bauer Jeanett2,Ritacco Viviana3,Leão Sylvia Cardoso4,Pavlik Ivo5,Vincent Veronique6,Rastogi Nalin7,Gori Andrea8,Bodmer Thomas9,Garzelli Carlo10,Garcia Maria J.11

Affiliation:

1. Diagnostic Laboratory of Infectious Diseases and Perinatal Screening, National Institute of Public Health and the Environment, 3720 BA Bilthoven, The Netherlands1;

2. Department of Mycobacteriology, Division of Diagnostics, Statens Serum Institut, 2300 Copenhagen S, Denmark2;

3. Pan American Institute for Food Protection and Zoonoses, Martinez 1640, Argentina3;

4. Departamento de Microbiologia, Imunologia e Parasitologia, Universidade Federal de São Paulo, 862.3, Andar, São Paulo, Brazil4;

5. Veterinary Research Institute, Hudcova 70, 621 32 Brno, Czech Republic5;

6. Laboratoire de Référence des Mycobactéries, Institut Pasteur, 75724 Paris Cedex 15, France6;

7. Unité de la Tuberculose et des Mycobactéries, Institut Pasteur, 97165 Pointe-à-Pitre Cedex, Guadeloupe, French West Indies7;

8. Clinic of Infectious Diseases, Luigi Sacco Hospital, University of Milan, 20157 Milan,8 and

9. Institute for Medical Microbiology, University of Berne, Berne, Switzerland9; and

10. Department of Biomedicine, University of Pisa, 56127 Pisa,10 Italy;

11. Departmento de M. Preventiva, Facultad de Medicina, Universidad Autonoma, 28029 Madrid, Spain11

Abstract

ABSTRACT Mycobacterium avium has become a major human pathogen, primarily due to the emergence of the AIDS epidemic. Restriction fragment length polymorphism (RFLP) typing, using insertion sequence IS 1245 as a probe, provides a powerful tool in the molecular epidemiology of M. avium -related infections and will facilitate well-founded studies into the sources of M. avium infections in animal and environmental reservoirs. The standardization of this technique allows computerization of IS 1245 RFLP patterns for comparison on a local level and the establishment of M. avium DNA fingerprint databases for interlaboratory comparison. Moreover, by combining international DNA typing results of M. avium complex isolates from a broad spectrum of sources, long-lasting questions on the epidemiology of this major agent of mycobacterial infections will be answered.

Publisher

American Society for Microbiology

Subject

Microbiology (medical)

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