GC Content-Associated Sequencing Bias Caused by Library Preparation Method May Infrequently Affect Salmonella Serotype Prediction Using SeqSero2
Author:
Affiliation:
1. Center for Food Safety, University of Georgia, Griffin, Georgia, USA
Publisher
American Society for Microbiology
Subject
Ecology,Applied Microbiology and Biotechnology,Food Science,Biotechnology
Link
https://journals.asm.org/doi/pdf/10.1128/AEM.00614-20
Reference10 articles.
1. SeqSero2: Rapid and Improved Salmonella Serotype Determination Using Whole-Genome Sequencing Data
2. Salmonella Serotype Determination Utilizing High-Throughput Genome Sequencing Data
3. Comparison of the sequencing bias of currently available library preparation kits for Illumina sequencing of bacterial genomes and metagenomes
4. Library preparation methodology can influence genomic and functional predictions in human microbiome research
5. Impact of three Illumina library construction methods on GC bias and HLA genotype calling
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