Genome Sequence of the Attenuated Equid Alphaherpesvirus 1 Strain AK-2011, Isolated in Kazakhstan-Reference-Cited by-同舟云学术

Genome Sequence of the Attenuated Equid Alphaherpesvirus 1 Strain AK-2011, Isolated in Kazakhstan

Published:2023-03-16 Issue:3 Volume:12 Page:
ISSN:2576-098X
Container-title:Microbiology Resource Announcements
language:en
Short-container-title:Microbiol Resour Announc

Author:

Karamendin Kobey¹²^ORCID,Abishov Abdikalyk³,Kydyrmanov Aidyn¹²,Akhmetzhanova Moldir⁴

Affiliation:

1. Laboratory of Viral Ecology, Scientific Production Center of Microbiology and Virology, LLP, Almaty, Kazakhstan

2. Kazakh National Agrarian Research University, Almaty, Kazakhstan

3. Virology Laboratory, SPE DiaVak-ABN, LLP, Almaty, Kazakhstan

4. Virology Laboratory, Antigen, LLP, Almaty, Kazakhstan

Abstract

In 2011, there was an outbreak of a disease with mass abortions among horses in southeastern Kazakhstan. The AK-2011 strain was isolated from an aborted fetus and subsequently identified as equid alphaherpesvirus 1. Here, we describe the nearly complete genome sequence of the AK-2011 strain, attenuated for vaccine development.

Funder

Ministry of Agriculture ot the Republic of Kazakhstan

Publisher

American Society for Microbiology

Subject

Genetics,Immunology and Microbiology (miscellaneous),Molecular Biology

Link

https://journals.asm.org/doi/pdf/10.1128/mra.01328-22

Reference9 articles.

1. World Organization of Animal Health. 2022. Chapter 12.8. Infection with equid herpesvirus-1 (equine rhinopneumonitis). In Terrestrial animal health code. World Organization of Animal Health, Paris, France. https://www.woah.org/fileadmin/Home/eng/Health_standards/tahc/current/chapitre_equine_rhinopneumonitis.pdf.

2. AK‐2011 strain for the development of a vaccine against equine rhinopneumonitis

3. Andrews S. 2010. FastQC: a quality control tool for high throughput sequence data. https://www.bioinformatics.babraham.ac.uk/projects/fastqc.

4. Using SPAdes De Novo Assembler

5. Geneious Basic: An integrated and extendable desktop software platform for the organization and analysis of sequence data