Complete Genomic Sequences of Two Agarolytic <i>Vibrio</i> Species Isolates from the Red Algae <i>Gracilaria</i>-Reference-Cited by-同舟云学术

Complete Genomic Sequences of Two Agarolytic Vibrio Species Isolates from the Red Algae Gracilaria

Published:2022-12-15 Issue:12 Volume:11 Page:
ISSN:2576-098X
Container-title:Microbiology Resource Announcements
language:en
Short-container-title:Microbiol Resour Announc

Author:

Ito Mei¹,Muta Mikihisa²,Funatsu Takashi²,Hatada Yuji¹,Iizuka Ryo²³^ORCID

Affiliation:

1. Department of Life Science and Green Chemistry, Faculty of Engineering, Saitama Institute of Technology, Saitama, Japan

2. Graduate School of Pharmaceutical Sciences, The University of Tokyo, Tokyo, Japan

3. Department of Biological Sciences, Graduate School of Science, The University of Tokyo, Tokyo, Japan

Abstract

We report the complete genomic sequences of two agarolytic Vibrio species strains, STUT-A11 and STUT-A16, isolated from the red algae Gracilaria . Genomic annotations revealed that both strains harbor four β-agarases, α-neoagarooligosaccharide hydrolase, and agarolytic β-galactosidase, which support efficient agarose catabolism.

Funder

MEXT | Japan Society for the Promotion of Science

Institute for Fermentation, Osaka

Publisher

American Society for Microbiology

Subject

Genetics,Immunology and Microbiology (miscellaneous),Molecular Biology

Link

https://journals.asm.org/doi/pdf/10.1128/mra.00934-22

Reference12 articles.

1. Agarose degradation for utilization: Enzymes, pathways, metabolic engineering methods and products

2. NanoPack: visualizing and processing long-read sequencing data

3. fastp: an ultra-fast all-in-one FASTQ preprocessor

4. Unicycler: Resolving bacterial genome assemblies from short and long sequencing reads

5. Pilon: An Integrated Tool for Comprehensive Microbial Variant Detection and Genome Assembly Improvement

Cited by 3 articles. 订阅此论文施引文献订阅此论文施引文献，注册后可以免费订阅5篇论文的施引文献，订阅后可以查看论文全部施引文献

1. Complete genomic sequence of a Marinobacter species, a potential polyethylene degrader isolated from surface seawater;Microbiology Resource Announcements;2024-09-10

2. Deformability-Based Microfluidic Microdroplet Screening to Obtain Agarolytic Bacterial Cells;Analytical Chemistry;2023-10-25

3. Complete Genomic Sequence of an Agarolytic Pseudoalteromonas Species Isolated from Deep Seawater;Microbiology Resource Announcements;2023-07-18