Metagenomes from Soils along an Agricultural Transect in Ulster County, New York-Reference-Cited by-同舟云学术

Metagenomes from Soils along an Agricultural Transect in Ulster County, New York

Published:2023-03-16 Issue:3 Volume:12 Page:
ISSN:2576-098X
Container-title:Microbiology Resource Announcements
language:en
Short-container-title:Microbiol Resour Announc

Author:

de Santana Carolina Oliveira¹,Spealman Pieter²^ORCID,Gresham David²^ORCID,Perron Gabriel G.¹²³^ORCID

Affiliation:

1. Bard Center for Environmental Sciences and Humanities, Bard College, Annandale-on-Hudson, New York, USA

2. Center for Genomics and Systems Biology, New York University, New York, New York, USA

3. Department of Biology, Reem-Kayden Center for Science and Computation, Bard College, Annandale-on-Hudson, New York, USA

Abstract

Many modern farming practices negatively impact ecosystems on the local and global scales. Here, we assessed the taxonomic structures of 48 soil microbial communities along an agricultural transect using 16S rRNA and internal transcribed spacer (ITS) amplicon sequencing. We further characterized the functional structures of a subsample of 12 microbiomes using whole-genome sequencing.

Publisher

American Society for Microbiology

Subject

Genetics,Immunology and Microbiology (miscellaneous),Molecular Biology

Link

https://journals.asm.org/doi/pdf/10.1128/mra.01015-22

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