Genome Sequence of Citrobacter freundii AMC0703, Isolated from the Intestinal Lumen of an 11-Year-Old Organ Donor-Reference-Cited by-同舟云学术

Genome Sequence of Citrobacter freundii AMC0703, Isolated from the Intestinal Lumen of an 11-Year-Old Organ Donor

Published:2020-11-12 Issue:46 Volume:9 Page:
ISSN:2576-098X
Container-title:Microbiology Resource Announcements
language:en
Short-container-title:Microbiol Resour Announc

Author:

Marsh Alan J.¹²,Chandrashekhar Kshipra¹²,Ng Sandy¹²,Roach Jeff²³,Magness Scott T.¹⁴⁵,Azcarate-Peril M. Andrea¹²^ORCID

Affiliation:

1. Department of Medicine, Division of Gastroenterology and Hepatology, School of Medicine, University of North Carolina, Chapel Hill, North Carolina, USA

2. UNC Microbiome Core, Center for Gastrointestinal Biology and Disease, School of Medicine, University of North Carolina, Chapel Hill, North Carolina, USA

3. UNC Information Technology Services and Research Computing, University of North Carolina, Chapel Hill, North Carolina, USA

4. UNC/NC State University Joint Department of Biomedical Engineering, Chapel Hill, North Carolina, USA

5. Department of Cell Biology & Physiology, School of Medicine, University of North Carolina, Chapel Hill, North Carolina, USA

Abstract

Citrobacter freundii AMC0703 was isolated from the intestinal mucosa of an 11-year-old organ donor. Genome analysis revealed the presence of multiple factors potentially aiding in pathogenicity, including fimbriae, flagella, and genes encoding resistance to fluoroquinolones, cephamycin, fosfomycin, and aminocoumarin.

Funder

HHS | NIH | National Institute of Diabetes and Digestive and Kidney Diseases

Publisher

American Society for Microbiology

Subject

Genetics,Immunology and Microbiology (miscellaneous),Molecular Biology

Link

https://journals.asm.org/doi/pdf/10.1128/MRA.00994-20

Reference14 articles.

1. Citrobacter freundii fitness during bloodstream infection

2. Low-Virulence Citrobacter Species Encode Resistance to Multiple Antimicrobials

3. A comparison of sequencing platforms and bioinformatics pipelines for compositional analysis of the gut microbiome

4. SPAdes: A New Genome Assembly Algorithm and Its Applications to Single-Cell Sequencing

5. CheckM: assessing the quality of microbial genomes recovered from isolates, single cells, and metagenomes

Cited by 2 articles. 订阅此论文施引文献订阅此论文施引文献，注册后可以免费订阅5篇论文的施引文献，订阅后可以查看论文全部施引文献

1. First identification and genomic features of multidrug-resistant Citrobacter freundii ST669 strain isolated from a domesticated duck in Bangladesh;Heliyon;2024-09

2. Effect of the compound bacterial agent on microbial community of the aerobic compost of food waste;Letters in Applied Microbiology;2021-10-19