Whole-Genome Transcription Profiling of Rhesus Monkey Rhadinovirus

Author:

Dittmer Dirk P.12,Gonzalez Carlos M.12,Vahrson Wolfgang1,DeWire Scott M.23,Hines-Boykin Rebecca1,Damania Blossom123

Affiliation:

1. Department of Microbiology and Immunology

2. Lineberger Comprehensive Cancer Center

3. Curriculum in Genetics and Molecular Biology, University of North Carolina at Chapel Hill, Chapel Hill, North Carolina 27599

Abstract

ABSTRACT Rhesus monkey rhadinovirus (RRV) and Kaposi's sarcoma-associated herpesvirus (KSHV; also called human herpesvirus 8) belong to the gamma-2 grouping of herpesviruses. RRV and KSHV share a high degree of sequence similarity, and their genomes are organized in a similar fashion. RRV serves as an excellent animal model system to study the gamma herpesvirus life cycle both in vitro and in vivo. We have developed a high-sensitivity, high-throughput, high-specificity real-time quantitative reverse transcriptase-based PCR assay for RRV and have used this assay to profile transcription from the whole RRV genome during de novo productive infection of rhesus fibroblasts. Using this assay, we demonstrate that the genome-wide transcription profile for RRV closely parallels the genome-wide transcription profile for KSHV.

Publisher

American Society for Microbiology

Subject

Virology,Insect Science,Immunology,Microbiology

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