Differential Overlap in Human and Animal Fecal Microbiomes and Resistomes in Rural versus Urban Bangladesh

Author:

Swarthout Jenna M.1ORCID,Fuhrmeister Erica R.1,Hamzah Latifah2,Harris Angela R.3,Ahmed Mir A.4,Gurley Emily S.45,Satter Syed M.4,Boehm Alexandria B.2ORCID,Pickering Amy J.16ORCID

Affiliation:

1. Department of Civil and Environmental Engineering, Tufts University, Medford, Massachusetts, USA

2. Department of Civil and Environmental Engineering, Stanford University, Stanford, California, USA

3. Department of Civil, Construction, and Environmental Engineering, North Carolina State University, Raleigh, North Carolina, USA

4. International Centre for Diarrhoeal Disease Research, Bangladesh, Dhaka, Bangladesh

5. Department of Epidemiology, Johns Hopkins Bloomberg School of Public Health, Baltimore, Maryland, USA

6. Department of Civil and Environmental Engineering, University of California, Berkeley, Berkeley, California, USA

Abstract

While the development of antibiotic resistance in animal gut microbiomes and subsequent transmission to humans has been demonstrated in intensive farming environments and high-income countries, evidence of zoonotic exchange of antibiotic resistance in LMIC communities is lacking. This research provides genomic evidence of overlap of antibiotic resistance genes between humans and animals, especially in urban communities, and highlights chickens as important reservoirs of antibiotic resistance.

Funder

Bill and Melinda Gates Foundation

Tufts Institute of the Environment

Tufts University

National Science Foundation

Publisher

American Society for Microbiology

Subject

Ecology,Applied Microbiology and Biotechnology,Food Science,Biotechnology

Reference102 articles.

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2. Agriculture for Improved Nutrition: The Current Research Landscape

3. Human diarrhea infections associated with domestic animal husbandry: a systematic review and meta-analysis

4. Is Exposure to Poultry Harmful to Child Nutrition? An Observational Analysis for Rural Ethiopia

5. EFSA Panel on Biological Hazards. 2010. Scientific opinion on quantification of the risk posed by broiler meat to human campylobacteriosis in the EU. 10.2903/j.efsa.2010.1437.

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